Meiothermus ruber DSM 1279: Mrub_2126
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Entry
Mrub_2126 CDS
T01193
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb03030
DNA replication
mrb03430
Mismatch repair
mrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mrub_2126
03430 Mismatch repair
Mrub_2126
03440 Homologous recombination
Mrub_2126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrb03032
]
Mrub_2126
03400 DNA repair and recombination proteins [BR:
mrb03400
]
Mrub_2126
Enzymes [BR:
mrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mrub_2126
DNA replication proteins [BR:
mrb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mrub_2126
DNA repair and recombination proteins [BR:
mrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mrub_2126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADD28880
UniProt:
D3PTU7
LinkDB
All DBs
Position
complement(2174565..2178338)
Genome browser
AA seq
1257 aa
AA seq
DB search
MATELNSSGQSHDPNACPTCKFAHLHQHTQFSLLDGAARLKDLLKWVKQVSPEEPMLAMT
DHGNMFGAVQFYKYATELGVKPIIGYEAYVAAESRFDRKQGKGLDGGYFHLTLLAQNMEG
YQNLSRLASRAYLEGFYGKPRIDREILREHNAGIIALSGCLGAEIPQFILQERFEDAEKR
LQEYLAIFGPERYFIEIQNHGLAEQHKVNRVLKEFADKYGLGLVATNDGHYVKKDDAEAH
AVLLAVQSKATWDDPNRWKFPCDEFYVKSPQEMRQTFEDERNLWGSRMDELFDNSVNIGR
MCEVELVPKKVQYRIPKYPLPEGRTEVVYFRELTFNGLLKRYPDRVTPELYREFLRKLGR
PVPHGDGEVLALELARIEDLEATRAHLPELREGIQWDGWAILSRAIYELTVVERMGFPGY
LLIVSDFINWAKNNGISVGPGRGSAAGSLVTYATRITNIDPLEYNLLFERFLNPARVSMP
DIDTDFSDVRRGEVIEYVRQRYGDEMVAQIGTFGTLASKAAIKDAARVFGLPVKKADELA
KLIPVTFGKPMPLDKAIETIPDLRAEMEKDPLVKRVLEVAQKLEGLSRQSSVHAAGVVIS
DVPLRDYIPLMRAGDTGAKVTQYDMGSVEALGFLKMDFLGLRTLSFLDECKRIIKESKGV
ELDYDNLPIDDAKTFELLGRGETKGVFQLDSAGMTSAVRGLKPRRIQDIIALGALYRPGP
MENIPTYIRRHHGREEVSYPQFPNAEKFIRPILEETYGIPVYQEQIMQIATAVAGYSLGE
ADLLRRAMGKKKMEEMVKQRAQFKEGAAKNGIPAEEADRLFDLLEAFANYGFNKSHAAAY
AILTYQTAYVKAHFPVEFFAAVLTVERHDSDKVAEYIRAARTAGVEVLPPDINQSGFSFR
ALEKSVLFGLSAVKNVGETPTELILRERERGGPYKSLPDFLRRLDGTVANKRVVESLIKA
GAFDAFGPRGPMLAALDDLLKWAQAEREQAQSGMMGLFGESLEPVIPAVPQLDAITQLRM
EKEALGIYVTGHPLSRYQGLREAASCTIEELPQAFAELKGNRNRARLLLAGMVEGIVRKP
TKSGGMLVRFTLADETGAVEVVAFGRAYDKISPRIAEDAAVLVAVEVEPDGEGETLRVVA
QEVFPYHELEGLPKVLELELDMALLDEEKLLDLRSRLDEVAGPLPVQLKVRGPGGWALVE
AREVRAAEEALPVLKDLDWLEARLIPDREMLLGYGKPTEGNGFRNQKGPDQGPVVPF
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgagcttaattcatccgggcaatcgcacgatcccaacgcctgtccaacctgt
aaattcgcccacctgcaccagcacacccagttcagcctgctggatggggcggcccggctc
aaagacctactgaaatgggtcaagcaggtctcgcccgaggagcccatgctggccatgacc
gaccacggcaacatgtttggggcggtgcagttttacaaatacgccaccgagctgggggtc
aagccgatcatcggctacgaggcctatgtggcggcggagtcgcgcttcgaccgcaagcag
ggcaaggggctggatgggggttactttcacctcacgctgctggcgcagaacatggagggc
taccagaacctctcccgcctggccagccgggcctacctcgagggcttctacggcaaaccc
cgcatcgaccgcgagattctgcgcgaacacaacgccggcatcatcgcgctttcgggctgc
ctgggggccgagattccccagttcatcctgcaggagcgcttcgaagacgccgaaaaacgc
ctgcaggagtacctcgcgattttcggcccggaacgctactttatcgaaattcagaaccac
ggcctggccgagcagcacaaggtgaacagggttctgaaggagttcgccgataagtacggc
ctgggcctggtggctaccaacgacggacactacgtcaagaaagacgacgccgaggcccac
gcggtgttgctggcggtgcagtccaaggccacctgggacgaccccaaccgctggaagttt
ccctgcgacgagttctacgtcaagagcccccaggagatgcgccagaccttcgaggacgaa
agaaacctctggggcagccgcatggatgagctgttcgacaactcggtgaacatcgggcgg
atgtgcgaggtggagctggtgcccaaaaaggtgcagtaccgcatccccaagtaccctttg
cccgagggtcgcaccgaggtggtctacttccgcgaactcacctttaatggcttgctcaag
cgctaccccgaccgggtgacccccgagctctaccgggaattcctgcgcaagctaggccga
ccggttccgcatggggatggggaggtgctggccctcgagctggcccgcatcgaggacctc
gaggccacccgggcccacctgcccgagctcagggaaggcatccagtgggatggctgggcc
attctctcgcgcgccatctacgaactgaccgtggtggagcgcatgggctttccgggctac
ctgctcatcgtgagcgatttcatcaactgggccaagaacaacggcatctcggtggggccg
ggccgcggctcggcggcgggctcgctggtgacctatgccacccgcattaccaacatcgac
cccctggagtacaacctgctgttcgagcgcttcctcaacccggcccgggtctccatgccc
gacatcgacaccgacttctcggacgtgcgccggggcgaggtgatcgagtatgtgcgccag
cgctacggcgacgagatggtagcccagatcggcaccttcggcacgctggcctccaaggcg
gccatcaaggatgcggcgcgggtgtttggcctgccggtcaaaaaagccgacgagctggcc
aagctcatcccggtgaccttcggcaagccgatgccgctggacaaggcaattgaaaccatt
cccgacctgcgggccgagatggaaaaagaccccctggtgaagcgggtgctcgaggtggcc
cagaagctcgagggcctctcgcgccagagcagcgtacacgccgccggggtggtcatctcg
gacgtgcctttgcgcgactacatccccctgatgcgggccggggataccggggccaaggtc
acccagtacgacatgggctcggtggaggccctgggcttcctcaagatggactttctgggt
ctgcgcacgctctcgtttttggacgagtgcaagcgcatcatcaaggagtccaagggggtc
gagctcgactacgacaacctgcccatcgacgacgccaaaaccttcgagctgctgggccgg
ggggagaccaagggggtcttccagctcgactcggccggcatgaccagcgcggtgcggggg
ctcaagccgcgccgcatccaggacatcatcgccctgggggcgctgtaccggcccggcccc
atggagaacatccccacctacatccgccgccaccacgggcgggaggaggtgagctacccg
cagttccccaacgccgagaagttcattcggcccatcctggaggagacctacgggattccg
gtttaccaggagcagatcatgcagattgccaccgcggtggccggctacagcctgggggag
gccgacctgctgcgcagggccatgggcaaaaagaagatggaggagatggtcaagcagcgg
gcgcagtttaaggaaggggccgccaaaaacggcatccccgccgaggaagccgaccggttg
tttgatttgctcgaggccttcgccaactacggcttcaacaagagccacgccgcggcctac
gccatcctgacctaccagaccgcctatgtaaaagcccacttcccggtggagttcttcgct
gcggtgctcacggtggaacgccacgactccgacaaggtggcggagtacatccgggcagcc
cgcacggctggggtggaggtgctgccccccgatatcaaccagtcgggttttagcttccgg
gccctggaaaagagcgtgctgtttgggctttcggcggttaagaacgtgggcgagaccccc
accgagctcattttgcgggaacgcgagcggggcgggccctacaaatcgctgccggacttc
ctgcggcggctcgatggcaccgtggccaacaagcgggtggtggagtccttgatcaaggcc
ggggccttcgatgcttttgggcctcgaggccccatgctggccgccctcgacgacctgctc
aagtgggcccaggccgagcgcgaacaggcccagtcggggatgatggggctgtttggcgag
tcgctcgagccggtgatcccggccgtgccccagttggacgccatcacccagcttcgcatg
gagaaagaggccctgggtatttacgtgaccgggcaccccctctcgcgctaccagggcctg
cgcgaggccgcgagctgcacgatagaggagctgccccaggcctttgccgaactcaaggga
aaccgcaaccgtgcgcggctgctgctggccggtatggtggagggcattgtgcgcaagccg
accaagtcgggggggatgctggtgcgctttaccctggccgacgagaccggcgcggtggag
gtggtggcctttggccgggcctacgacaaaatatccccgcgcatcgccgaggatgccgcg
gtgctggtggcggtggaggtggagcccgatggcgagggtgagaccctgcgggtggtggcc
caggaggtgtttccctaccacgagctcgagggcctgcccaaggtgctggagctcgagctg
gacatggccctgctcgacgaggaaaaactcctggacttgcgcagccggctcgacgaggtg
gccgggccgttgccggtgcagctcaaggtgcgggggccgggcggctgggcgctggtggag
gcccgggaggtgcgggccgccgaggaggccctgccggttctgaaggatctggactggctc
gaggcccgcctgatccccgaccgcgagatgctgctgggctatggcaaaccgaccgagggc
aacggctttagaaaccagaaggggcccgaccaggggccggtggtgccgttctga
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