Meiothermus ruber DSM 1279: Mrub_2285
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Entry
Mrub_2285 CDS
T01193
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb03030
DNA replication
mrb03410
Base excision repair
mrb03420
Nucleotide excision repair
mrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mrub_2285
03410 Base excision repair
Mrub_2285
03420 Nucleotide excision repair
Mrub_2285
03440 Homologous recombination
Mrub_2285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrb03032
]
Mrub_2285
03400 DNA repair and recombination proteins [BR:
mrb03400
]
Mrub_2285
Enzymes [BR:
mrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mrub_2285
DNA replication proteins [BR:
mrb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mrub_2285
DNA repair and recombination proteins [BR:
mrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mrub_2285
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mrub_2285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
LAGLIDADG_3
Intein_splicing
Hint_2
LAGLIDADG_WhiA
TraI_hel_assoc_N
WhiA_N
Motif
Other DBs
NCBI-ProteinID:
ADD29037
UniProt:
D3PLE6
LinkDB
All DBs
Position
complement(2337447..2341268)
Genome browser
AA seq
1273 aa
AA seq
DB search
MEQPSLFSSESPSVELPRPDRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLL
KLLKEDGDCVIVVFDPPTRTFRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLE
VPGYEADDVIGTLAKKAEQEGYPVRILTGDRDSFQLLSEAVQVMLPDGRLMHPQAVQEKY
GVSVAQWVDYRSLVGDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALSPKIRASL
EESRDNVQLSRTLSLIHTDLPLELDFRDCHRREPDRGALREALEKLEFGSILRELNLLAA
PPAAEEAPWPPPPEAFLGYTLDRAQPMWANWLGLAAYAGGKVYRGQPSLQELKKFPEIRS
MVAKDLSVLALKEGVWVPPGDDPMLLAYLYDPSNSDPASTVRRYGAGDWGSDPGERAQAA
HTLWETLQSRIGENPKIEWLYQQIEKPLSAVLARIEARGISLNAEYLLQLSEELAKEISY
LEAEIHRLAGRSFNVNSRDQLEVVLYDELKLSAPGRKTQTGKRSTAASALEELLGQHPII
ERILTYRELTKLKSTYLDPLPKLIHPKTGRLHTRFNQTGTATGRLSSVDPNLQNIPVRTE
IGRRIRKAFRAAPGMRLVVADYSQIELRVLAHLSGDENLINVFREGRDIHTQTAAWMFGL
EPDKVGAEQRRAAKCLVEGTKVATGRGWLPIEQVRVGDCVQTDGKMRRVVGLLDNGIQPT
IRISTQRGFELRGTPHHRIRVVAKDGAVVWRQLQHLQAGDQVVLRRHGAFGYCNDLPPLE
PVAITRHKPLPWPQHLDQKMALWLGYMVAEGTAIRAKQHRERYGVVLMGLGRRDLDVLDE
VGALWEWLAGSRLKRYEKQRSVHWAVASTDLAEWIAKWCGAKSDQKRIPNFLWQAPASIQ
ASFLQALFEGDGSISRRRGTTYIRFATASLQLAKDVQRMLLNFGIASTRSAEPRGQHKTS
HILLIGEPSDVERFAKHIGFRSQRKSALLRQHTTRRSTYIMPHQEQRLRRIYAALSLKGR
DKEKIYECIRTHAQPVGLNATRIQLLLSDPAISGHRYTRVWRWWHENDLFADAISLVEVA
KPARVYDLSVEGKPAYLAEGFVSHNTINFGVLYGMSAHRLSNELSISYAEAEGFIERYFA
SYPKVREWIERVLADARQTGYVETMFGRRRFVADLGSRVRSVREAAERMAFNMPVQGTAA
DLMKLAMVKLQPELEPLEAHLVLQVHDELLVEAPADKAEAVAGVVREVMQQAWALAVPLE
VGTGIGENWLEAK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
gtggagcaacccagtctattcagcagcgaaagcccgtccgtcgagctgcccaggcccgat
cgcatctggctggtggatgggcatcacctggcttaccgcagctactttgccttcgaaaag
ctggcgacctcgaggggcgaacccacccaggccatttttggctttctgcgcaccttactc
aaactcctcaaggaagacggcgactgcgtgatcgtggtcttcgacccgcccaccagaacc
ttccggcacgacgcttttgaggagtacaaggccggacgggcggccacccccgacgacttt
cacccgcagctagagaaaatcaaagaactggtggatctgatgggcctccaacggctggaa
gtgccgggctacgaggccgacgacgtgattggaaccctggccaaaaaagcagaacaggag
ggctatccagtgcgcatcctgaccggcgatcgcgacagctttcagctgctctccgaggcc
gtgcaggtgatgctgcccgacggacggctaatgcacccccaggccgtgcaggagaagtac
ggtgtatcggtggcgcagtgggtggattaccgctcgctggtgggcgattcttccgataac
ctgccgggagccaagggcatcggagaaaagaccgcggccaagctcttgcaggagtgggga
tcgctggaaggtctgtacgcaaacttagaagccctgtcccccaaaattcgcgccagcctc
gaggagagccgggacaacgttcagctctcccggacgctttcgctaatccacaccgacctt
cccctcgagctcgacttccgcgactgccaccggcgtgaacccgaccgcggggccctgcgc
gaagccctggaaaaactcgagttcggctccattctacgcgagctaaacctgctggccgcc
cctcccgccgccgaggaagctccctggccccccccgcccgaggcctttctgggctacacc
ctcgaccgcgcccagcccatgtgggccaactggctgggtctggccgcctatgccgggggc
aaggtgtaccggggccagcccagcctgcaggagctcaaaaagttccccgagattcgcagc
atggtggccaaagacctctcggtgctggccctcaaggaaggggtctgggtgccccccggc
gacgaccccatgctgctggcctacctctacgacccctccaactccgaccccgccagcacc
gtgcggcgctacggggccggggactggggttccgaccctggcgagcgggcccaggccgcc
cataccctatgggagaccctgcaaagccgcatcggtgagaaccccaaaatcgagtggctg
tatcagcagatcgaaaaaccgctctcggcggttttggcccgaatcgaggcccggggcatc
tccctcaatgccgaatacctgttgcaactttcggaagaacttgccaaggaaatttcctac
ctcgaggccgagattcaccggctggccgggcgttcttttaacgtgaactcacgcgatcag
ctcgaggtggtgctctacgacgaactcaaactgagcgccccgggccgcaagacccagacc
ggcaaacgctccaccgctgccagcgcgctcgaggagctgttaggccagcaccccatcatc
gaacgcatcctgacctaccgcgagctgaccaagctcaaaagcacctacctcgacccgctc
cccaagctaattcaccccaaaaccggccgcctgcacacccgcttcaaccagaccggcacc
gccaccgggcggctttcctcggtggatcccaacctgcaaaacatccccgtgcgcaccgag
attggccgccgcatccgcaaggccttccgggcggcaccggggatgaggctggtggtggcc
gactactcccagatcgagctgcgggtgctggcccacctctcgggtgacgagaacctgatt
aatgtcttccgcgaaggccgggacatccacacccagaccgcggcctggatgttcgggttg
gagccggacaaagtgggggccgaacagcgccgggctgcgaaatgccttgtcgagggaacc
aaagtcgccaccggacgagggtggcttcccatcgagcaggtgcgtgttggtgactgtgtg
caaaccgacggcaagatgcgaagggtagtcgggctgctggataacggtattcagccaacc
atacggatcagtacccaacggggatttgagttacgtggcacgccccatcatcgaattcgc
gttgttgctaaagacggtgcagttgtctggcgacaacttcagcacctacaggcaggcgat
caagtggtcttaagaaggcatggtgcgtttggatactgcaatgatctacccccacttgaa
ccggttgccatcacccgccacaagccattaccctggcctcaacatctagaccaaaaaatg
gcgctctggcttggttatatggtggcagaaggaacagccatccgagccaaacagcaccgg
gagcgctatggcgtggtgcttatggggttgggccgccgggatttggacgtgctggatgaa
gtgggtgcactgtgggaatggctggcggggagccgcctgaagcggtatgaaaagcagcga
agtgttcattgggctgttgcaagcactgatctagccgagtggattgccaagtggtgtggc
gctaaatctgaccaaaagcgcatccccaacttcctgtggcaagcgcccgcatccattcag
gctagcttccttcaggcgttgtttgaaggggatggcagtattagtcggcgtagagggaca
acctacattcgctttgccactgccagcctgcaacttgcgaaggatgtacagcgtatgctg
cttaactttggaattgcctccacacgctctgctgagcctagaggccagcataaaaccagt
cacatccttctgattggagagccctctgacgtagagcgcttcgccaagcacattggcttt
cgctctcagcgaaaatcagcccttctcaggcagcacactactcgccgtagtacttacatc
atgccccatcaagaacaaagactacgccgtatctacgccgcgctgagtcttaagggtcgt
gataaggagaaaatttatgaatgcattcgcacccatgcccagcctgttgggttaaacgcc
acccgtatccaattactgcttagtgaccccgcaatcagcggccaccggtacactcgtgtt
tggcgttggtggcatgagaatgatctgtttgccgacgctattagcttggtagaagttgcc
aaaccagctcgcgtatacgacctgagcgtagaaggaaagcccgcataccttgcagaaggc
tttgtaagtcacaatacaattaactttggtgtgctctacggcatgtcggcccaccgccta
tccaacgagctttccatttcctatgccgaggccgaaggctttatcgagcgctacttcgcc
tcctaccccaaggtgcgggaatggattgaacgggtgttggccgatgcccggcagaccggc
tacgtagaaaccatgtttggccgccgccgctttgtggccgacctgggctcacgcgtgcgc
agcgtgcgggaggccgccgagcgcatggccttcaatatgccggtgcagggcaccgccgcc
gatttgatgaaactggctatggtcaagctccagccggagctcgagccgctggaagcccat
ctggtgctgcaggtgcacgacgagcttctggttgaggccccggccgataaggcggaggcg
gtggccggggtggtgcgcgaggtgatgcagcaggcctgggctttggcggtgcccctcgag
gtcggcaccggcatcggggagaactggctcgaggccaagtag
DBGET
integrated database retrieval system
