Meiothermus ruber DSM 1279: Mrub_2489
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Entry
Mrub_2489 CDS
T01193
Name
(GenBank) WD-40 repeat protein
KO
K14855
ribosome assembly protein 4
Organism
mrb
Meiothermus ruber DSM 1279
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrb03009
]
Mrub_2489
Ribosome biogenesis [BR:
mrb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Mrub_2489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EIPR1
Ge1_WD40
PD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WDR54
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_RFWD3
SGL
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_Nup120_160
PROPPIN
Beta-prop_VPS8
Motif
Other DBs
NCBI-ProteinID:
ADD29240
UniProt:
D3PMD4
LinkDB
All DBs
Position
2542370..2544067
Genome browser
AA seq
565 aa
AA seq
DB search
MGHRAPVGAVAFGPGGRLALGADTYVHLHQADGRFLRTLSGHSDTVRALDFAADGTLLSA
SSDTTLRLWNPQSGLLKGVLQGHRDQVWSARISPDGRQVLSGSADGELRLWSVPALGLSR
SIYAGRGWIYSVGLSPLNPVWAAGGQDGVLLWNPQSGHRLPLLGSLSVRALAWGPDGQLA
TGDRDGQIQLWSAEGRYVQQWSAHRLAVSALVWRKRAQLISGGQDGQIIFWDTGRPQKTL
QTASVLALAVGESRLLSGHDDGRARLWSLDGGLLRTLEPPAASVSALAYSPDGRLLASGG
WDGEVWLWNRQGQPIHRLSEAALEITALAFSPDGQYLAAGSRDGLTRLYQTGSGRLLQSL
EAHGNGVGALAFAPNGRALATGGRDRLIRLWDWRQGRKVLEFRAHESHVTGLAFSPDGRT
LYSSSSDESLAWWALRPEGVGLLRRVMAHARGLYGLALSPNGRLLATASHDQTLKLWDAQ
SGKLLRVLEGHTEAAQALAFSPDGQRLASVGWDKTLRLWSVQGPLLQTTSGFVRPLYAVA
WAPDGRLAVGSGTLRQAGTVALFRP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgggacaccgggccccggtgggggctgtggcttttggccctgggggaaggttggccctg
ggagcggatacctacgttcatctccaccaggccgatgggcgttttttgcgcaccctgagc
gggcacagcgataccgtgcgagccctggacttcgctgcggatggcaccttgctcagcgcg
tcctccgataccaccctgcggctgtggaacccccagagcggcctgctgaaaggcgtgttg
caaggccaccgcgatcaggtttggtcggcccgcatcagcccggatgggcgtcaggtgctc
agtggtagcgccgacggtgagttgcgcctttggagtgtgccagcgctgggcttgtctcgg
tctatttatgcagggcgcggctggatatacagcgttgggctttccccgttaaaccctgtc
tgggcagccggggggcaggatggggtgctcttgtggaatccccagagcggccaccggctg
ccccttctgggctccctctcggtgcgagcgctggcctgggggccggacggccagttggcc
actggcgaccgggacggacagatacaattgtggagtgccgaggggcgctatgtgcagcag
tggagtgcgcatcgcctggcggtgagcgccctggtctggcgcaagcgcgcgcagctcatc
agcggggggcaggacggccagattatcttctgggacacaggccggccccaaaaaaccctc
cagacggcctcggtgctggccctggctgtgggcgaaagccggctcctgagcggccacgac
gatgggcgggcccggttgtggagcctggacggagggctgctacgaaccctcgagccccct
gcggcctcggtgagcgccctggcctacagccccgacgggaggctgctggccagcgggggc
tgggacggcgaggtctggctgtggaaccgccaggggcagcccatccacaggctgagcgag
gccgccctggaaattaccgccctggccttcagcccggatgggcagtacctggccgcaggc
agccgcgacggcctgacccgcctctaccaaacaggtagcgggcggctgttgcagagcctc
gaggcccatggcaacggggtgggggccctggccttcgccccaaacggacgggccctggcc
accggcgggcgcgaccggttaatccggctctgggactggcggcagggccggaaggtgctc
gagttccgcgcccacgagtcccacgtaacgggcctggcttttagccccgacgggcgcacg
ctttatagcagcagcagcgatgaaagcctggcctggtgggccctgcgccccgagggggtg
gggctcctgcgccgggtcatggcccacgcccggggcctctacggcctggccctgagcccc
aacggacgcctgctggccaccgccagccacgaccagaccctcaagctctgggatgcccag
tcggggaagctgctccgggtgctggaagggcacaccgaggccgcccaggccctggccttc
tcgcccgacggccagcggctggccagcgtgggctgggacaagaccctgcgcctgtggagc
gtgcaggggccgcttttacagaccacctcagggtttgtgcggcccctctacgcggtggcc
tgggcccctgatggccggctggcggtgggcagcggcaccctgcggcaggccggcaccgtg
gctttattcagaccgtag
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