KEGG   Meiothermus ruber DSM 1279: Mrub_2489
Entry
Mrub_2489         CDS       T01193                                 
Name
(GenBank) WD-40 repeat protein
  KO
K14855  ribosome assembly protein 4
Organism
mrb  Meiothermus ruber DSM 1279
Brite
KEGG Orthology (KO) [BR:mrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mrb03009]
    Mrub_2489
Ribosome biogenesis [BR:mrb03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    Mrub_2489
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Ge1_WD40 PD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WDR54 eIF2A Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_DCAF4 WD40_RFWD3 SGL Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_Nup120_160 PROPPIN Beta-prop_VPS8
Other DBs
NCBI-ProteinID: ADD29240
UniProt: D3PMD4
LinkDB
Position
2542370..2544067
AA seq 565 aa
MGHRAPVGAVAFGPGGRLALGADTYVHLHQADGRFLRTLSGHSDTVRALDFAADGTLLSA
SSDTTLRLWNPQSGLLKGVLQGHRDQVWSARISPDGRQVLSGSADGELRLWSVPALGLSR
SIYAGRGWIYSVGLSPLNPVWAAGGQDGVLLWNPQSGHRLPLLGSLSVRALAWGPDGQLA
TGDRDGQIQLWSAEGRYVQQWSAHRLAVSALVWRKRAQLISGGQDGQIIFWDTGRPQKTL
QTASVLALAVGESRLLSGHDDGRARLWSLDGGLLRTLEPPAASVSALAYSPDGRLLASGG
WDGEVWLWNRQGQPIHRLSEAALEITALAFSPDGQYLAAGSRDGLTRLYQTGSGRLLQSL
EAHGNGVGALAFAPNGRALATGGRDRLIRLWDWRQGRKVLEFRAHESHVTGLAFSPDGRT
LYSSSSDESLAWWALRPEGVGLLRRVMAHARGLYGLALSPNGRLLATASHDQTLKLWDAQ
SGKLLRVLEGHTEAAQALAFSPDGQRLASVGWDKTLRLWSVQGPLLQTTSGFVRPLYAVA
WAPDGRLAVGSGTLRQAGTVALFRP
NT seq 1698 nt   +upstreamnt  +downstreamnt
gtgggacaccgggccccggtgggggctgtggcttttggccctgggggaaggttggccctg
ggagcggatacctacgttcatctccaccaggccgatgggcgttttttgcgcaccctgagc
gggcacagcgataccgtgcgagccctggacttcgctgcggatggcaccttgctcagcgcg
tcctccgataccaccctgcggctgtggaacccccagagcggcctgctgaaaggcgtgttg
caaggccaccgcgatcaggtttggtcggcccgcatcagcccggatgggcgtcaggtgctc
agtggtagcgccgacggtgagttgcgcctttggagtgtgccagcgctgggcttgtctcgg
tctatttatgcagggcgcggctggatatacagcgttgggctttccccgttaaaccctgtc
tgggcagccggggggcaggatggggtgctcttgtggaatccccagagcggccaccggctg
ccccttctgggctccctctcggtgcgagcgctggcctgggggccggacggccagttggcc
actggcgaccgggacggacagatacaattgtggagtgccgaggggcgctatgtgcagcag
tggagtgcgcatcgcctggcggtgagcgccctggtctggcgcaagcgcgcgcagctcatc
agcggggggcaggacggccagattatcttctgggacacaggccggccccaaaaaaccctc
cagacggcctcggtgctggccctggctgtgggcgaaagccggctcctgagcggccacgac
gatgggcgggcccggttgtggagcctggacggagggctgctacgaaccctcgagccccct
gcggcctcggtgagcgccctggcctacagccccgacgggaggctgctggccagcgggggc
tgggacggcgaggtctggctgtggaaccgccaggggcagcccatccacaggctgagcgag
gccgccctggaaattaccgccctggccttcagcccggatgggcagtacctggccgcaggc
agccgcgacggcctgacccgcctctaccaaacaggtagcgggcggctgttgcagagcctc
gaggcccatggcaacggggtgggggccctggccttcgccccaaacggacgggccctggcc
accggcgggcgcgaccggttaatccggctctgggactggcggcagggccggaaggtgctc
gagttccgcgcccacgagtcccacgtaacgggcctggcttttagccccgacgggcgcacg
ctttatagcagcagcagcgatgaaagcctggcctggtgggccctgcgccccgagggggtg
gggctcctgcgccgggtcatggcccacgcccggggcctctacggcctggccctgagcccc
aacggacgcctgctggccaccgccagccacgaccagaccctcaagctctgggatgcccag
tcggggaagctgctccgggtgctggaagggcacaccgaggccgcccaggccctggccttc
tcgcccgacggccagcggctggccagcgtgggctgggacaagaccctgcgcctgtggagc
gtgcaggggccgcttttacagaccacctcagggtttgtgcggcccctctacgcggtggcc
tgggcccctgatggccggctggcggtgggcagcggcaccctgcggcaggccggcaccgtg
gctttattcagaccgtag

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