Meiothermus ruber DSM 1279: Mrub_3001
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Entry
Mrub_3001 CDS
T01193
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mrub_3001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrb03400
]
Mrub_3001
Enzymes [BR:
mrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mrub_3001
DNA repair and recombination proteins [BR:
mrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mrub_3001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
ANCHR-like_BBOX
Motif
Other DBs
NCBI-ProteinID:
ADD29745
UniProt:
D3PQB2
LinkDB
All DBs
Position
complement(3038859..3041030)
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AA seq
723 aa
AA seq
DB search
MWVLKVALPLPLEPMTYLPPHADPRAEVLGYRVVVPWRGELRVGVVVGREEAPQKAFALR
EALAYLDAQPWLNPAALEFLLSAARDSFCAVGVLLNDLLPFLEPPLTHRVRLVPGADPAV
LPGGLEALAAGWQEAQGLDPKLLDFLREAGVLQEEVAERRTPAQALVVLREPAEGLSEKA
KAAWYALRDLRQVESMAALARAAGVGVGVVKGLLEKGYIGFVEVTPALEAVAARALEPLE
LPLSPVRLQGGRLLERLRALAGLVQKGPALLLFPEVSLLKKCQPFFPEAAVLHGEMKAEE
RRLVWGRLIQGAARWVLATYQGLLLPLDWERIVVVEEAAEAYKLPGGSRAFVPRLARLRA
QGLGVPIHYCSSVNSLEVWDEPSYLLPPPHPRLHLLDLHQERGWPLTGAAIALLQQVQEK
KRQAIVLSARRGYSAVLRCKQCDWKAMCPNCALPLRYHKSGRLGLLQCHQCGHEEKAPEL
CPSCQSDVFDPRGPGVEWLVEALGRYLPSLPRYRYTAEAKDDLRPLLAGEPGVLVGTTAI
LRGPVLPELALVLLPYADGFVLETDFRAVERYHRLLWQLTDLHPQRRPLLVLQTFEPGHA
AHRALQAASPQGFMEVELALRRTLGYPPASRMVKLEVAHPKEPVARDAIFRLAQLLQASA
EPGELLGPAPAPVARLRGQYVFHLLLKSSEERVRALMANLPPVRGARLRIDPDPQSFVGL
LED
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcttgaaggttgccctgcccttgccgctcgagccgatgacctacctgcccccg
cacgccgaccctcgagcggaggtgctgggctaccgggtggtggtgccctggcgcggcgag
ctgcgggtgggcgtggtggttgggcgcgaagaagctccccagaaagcctttgcgctgcgg
gaggccctggcctacctcgacgcgcagccctggctgaaccctgcagccctcgagtttcta
ttgtccgccgcccgcgacagcttttgtgcggtgggcgttttgctcaacgacctgctgccc
ttcctcgagcccccccttacccaccgggtgcggcttgtgcccggggccgacccggcggtg
ctacccggaggcctggaagccctggccgcaggctggcaggaggcccagggcctcgatccc
aagctgctggattttttgcgtgaggccggggttttgcaggaggaggtggctgagcggcgc
accccggcccaggccctggtggtgttgcgcgaacccgcggagggcctgagcgagaaggct
aaagcggcctggtatgccctgcgcgacctgcgccaggtggagagcatggccgcgctggct
cgagccgccggggtgggggtgggggtggtgaagggcctgctcgagaagggctatatcggg
tttgtggaggtaacgccggccctcgaggccgttgcggcgcgcgcgctcgagcccctggaa
ctgcccctgtcgccggtgcggctgcagggggggcggctgttggagcggctgcgggccctg
gcgggcctggtgcaaaagggcccggccctgctgctctttcccgaggtctcgctgctcaaa
aaatgccagcccttcttccccgaggccgccgttttacacggcgagatgaaagccgaggag
cgccgcttggtgtggggaaggcttattcagggggcggccaggtgggtgctggcgacctat
caggggctcttgcttccgctcgactgggaacgcatcgtggtggtggaggaggccgccgag
gcctacaagcttccggggggctcgagggccttcgtgccccggctggcccggctgcgggcc
caggggctgggggtgcccatccactactgctcgagcgtcaacagcctggaggtctgggac
gaaccatcctacctgctgcccccgccccacccgcggctgcacctgctggatctgcaccag
gagcggggctggcccctgaccggagccgccatcgccctgttgcagcaggtgcaggagaaa
aagcgccaggccattgtgctctcggcccggcggggctatagcgcagtgctgcgctgcaag
cagtgcgactggaaggctatgtgccccaactgcgccctgcccctgcgctaccacaagagc
gggcggctgggcctcttgcaatgccaccagtgcggccacgaggagaaagcgcccgagcta
tgccctagctgccagtccgacgttttcgaccccagggggccgggggtggagtggcttgtg
gaggccctggggcggtaccttcccagcctgccccgctaccgctacaccgccgaggccaaa
gacgacctgcgccccttgctggctggcgagccgggggtgctggtgggcaccaccgccatt
ctgcgggggccggtgctgcccgagctggcgctggtgctgctgccctatgccgatgggttt
gtcctcgagaccgactttcgggcggttgagcgctaccaccggcttttgtggcagctcacc
gacctgcacccccagcgccgcccgctgctggtgttgcagacctttgagccggggcacgcc
gcccaccgggcgctccaggccgccagcccccagggctttatggaggttgagttggccctg
cgccgcaccctgggttaccccccggccagccggatggtgaagctcgaggtggcccacccc
aaggagccggtggcccgcgatgccatctttcgcttagcccagcttctccaggccagcgcc
gagccaggcgagctgctgggcccggccccggcccctgtggcccgtctgcggggccagtac
gtgtttcacctgctgctcaaaagctccgaagagcgagtccgggccctgatggcgaacctg
cccccggtgcgcggcgcgcggctcaggatagaccccgatccgcaaagctttgtgggactg
ctggaggactga
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