Methanoculleus receptaculi: R6Y96_01335
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Entry
R6Y96_01335 CDS
T09536
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mrc
Methanoculleus receptaculi
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrc03016
]
R6Y96_01335
Enzymes [BR:
mrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
R6Y96_01335
Transfer RNA biogenesis [BR:
mrc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R6Y96_01335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
WOX57927
UniProt:
A0AAX4FVL8
LinkDB
All DBs
Position
249120..250589
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AA seq
489 aa
AA seq
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MQYQQPVNLKGIAWTAMQQYGFVPAFPPSVLREVERLKPRVFPAIIDDPRDLRTLPWSSI
DNYDSQDLDQIEVCEEGPGGEIQVMIAIADVDAYVPKGSETDRHAARNGTAVYTGVTTFP
MLPDRLSAGLTSLLPGQERLAVVIEYTVLPDGGIVPGDVYRAIVANQAKLVYEEVGDWLE
GSGPVPDMIRERPDLMRQILLQDRAATRMKSYRTERGALVLETIEPEPLVKGDQVFGLVI
QRQNRARCLIEEFMVAANRTLTAFLNSAGLPMIHRVVRKPNYWEEIVAVAAERGAALPEE
PDAEALTRFLIREKAADPERFPDLSLTVIKLMGTGEYVAFRPGEEPIGHFALAVADYTHG
TAPNRRYVDIIIQRLVKSVLAGEHEPPYAPEELDELASWLTGRDKAAQKVERFVRKAAAA
VLLGDRIGETFEAFVTGASDKGTYVRLIDPPAEGRVVIGERGLRVGQRIRVRLLAVDPYK
GYIDLGYTR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcaacagcccgtcaacctcaagggcatcgcctggacggcgatgcagcagtac
ggtttcgtcccggccttccccccatccgtcctccgcgaggtcgaaagactcaaaccgagg
gtcttcccggcgatcatcgacgaccctcgtgacctccgaacgctcccctggtcatcgatc
gacaattacgactcccaagacctggaccagatcgaggtctgtgaagaggggcctggcgga
gagatccaggttatgatcgcgatcgcggatgtcgacgcctacgtcccgaagggatcggag
actgatcgccatgccgcccggaacgggacggcggtctacaccggggttacaacctttccg
atgctgcccgaccgtctctctgccggcctgacatcgctccttcccggccaggaacgactg
gcggttgtcatcgagtataccgtcctccccgacgggggcattgtgcccggcgacgtctac
cgggcaatagttgcaaaccaggcgaagctcgtctacgaagaggtcggcgactggctggag
gggagcggcccggtgcccgatatgatccgggagagaccagacctcatgagacagatcctg
ctccaggaccgggccgcaacacggatgaagagttaccggacggagagaggcgcgctcgtc
cttgagaccatcgaacccgaaccgctcgtgaagggtgatcaggtgtttggtcttgtcatc
cagcggcagaaccgcgcccgctgcctgatcgaggagtttatggtcgcggcgaacaggacg
ctgacagcgttcctgaatagcgcgggtctcccgatgatccacagggtcgtccgcaaaccg
aactactgggaggagatcgttgccgtggcggcggagcgcggggcggcactgcccgaagag
ccggacgcggaggctctcacccgtttcctcatacgggagaaagcggccgaccccgagcgt
ttccctgacctctcacttaccgttataaaactcatggggacaggcgagtacgtggcgttt
cggccgggggaagagcctataggccacttcgccctcgctgtcgccgactacacccacggc
accgcaccaaaccggcgttacgtcgacatcatcatccagcggctggtaaaatcggtgctc
gccggtgaacacgaaccgccctacgcacccgaagaactcgacgaactcgcctcctggctc
acgggtcgggacaaggcagcccagaaggtcgagcggttcgtccggaaggcggcagcggcg
gtactcctcggggatcggatcggcgagaccttcgaggcgtttgtcaccggcgcctcggat
aaggggacatatgtccggctgatcgatccgccggccgaaggaagggtggtcattggggaa
cgggggctgcgggtcggccagaggatacgtgtccgcctgctggctgtcgacccctacaag
ggttacatcgatctcgggtatacccggtga
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