Methanoculleus receptaculi: R6Y96_04080
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Entry
R6Y96_04080 CDS
T09536
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mrc
Methanoculleus receptaculi
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrc03019
]
R6Y96_04080
Messenger RNA biogenesis [BR:
mrc03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
R6Y96_04080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DEXQc_Suv3
Toddler
Motif
Other DBs
NCBI-ProteinID:
WOX58422
UniProt:
A0AAX4FX31
LinkDB
All DBs
Position
765928..767940
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AA seq
670 aa
AA seq
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MKVIIQPQKSAYKLLFVEGDRVEGTGFVTLTATQKGQRPKNFKMRRRGSRHPAPVPTRDL
ITMLRRSSVALAAESPEFESFLADLQIPFSRIDICRFCQIEDRFVPVDKATGVRCGGEWI
CMECAKREMRRELGYMGRFGGSVLIHLEKLLAQVRDLDRVLASVGPERPDRRRTLFDRLE
AHEIEKTLHITDLSLPPAFVKAAGVDYLMPVQHLAVQSGLLEGQHLLVVSATASGKTFIG
EMAGMKNFLEGRGRMLFLVPLVALANQKYQRFRDRYGHLVRVALQVGVSRLNLPETRPAG
DRDVNAPVVVGTYEGIDHLLRTGKTLKDIGTVVIDEVQMLEDAERGHRLDGLIARLKYIA
PDAQFLYLSATIGAPGLLAEKLGANLVRYAERPVPLERHLIFIEREKKIAFIKQMVAEEY
RMRSSKGYRGQTIVFTNSRARCHVIADALGKMAVPYHAGLSAQERREVERRFSNGEVAAV
VTTAALAAGVDFPASQVIFDALAMGIQWLTVQEFHQMMGRAGRPDFHDLGRVVILAEPGG
SYSRTSGKTEEEVAIALLRGEMEEVAPEYDLEQSTEEFVANAVVCDGDEQQIIRMNRMMV
GTLEPALPTLLDYGLVRRRGGRIELTDMARVMAEHFIGAERLIQIRDLVRRADDAAWIVA
ELECAVDEER
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcatcatccagccgcagaaaagcgcgtacaaactgctttttgtcgagggcgac
cgcgttgaagggacgggtttcgtcaccctcaccgcgacccagaagggtcagcggccgaag
aacttcaagatgcgccgccgcggcagcagacacccggcacccgtccctacgcgtgacctg
atcacgatgctgcgccgctcatcggtggcccttgcagcggagagcccggagttcgagtcg
ttcctcgccgatctccagatcccgttttcacggatcgatatctgccggttctgccagatc
gaggacaggtttgtcccggtagataaggcgaccggggtgcgctgcggcggggagtggatc
tgcatggagtgcgcgaaacgcgagatgcgccgtgaactcggctacatggggaggttcggc
ggttctgtgctcatccatctggagaaactccttgcccaggtccgggatctcgaccgggtg
ctggcatcggttgggccagagcggcctgaccggcggcggacgctctttgacaggcttgag
gctcacgagatcgagaagacgctgcatatcaccgatctatcgctgcctcctgcgttcgtg
aaggccgccggcgtcgattatctgatgcccgtccagcacctggccgtccagagcggcctc
cttgaggggcagcatctccttgtggtctcggccacagcgagcggcaagaccttcatcggg
gagatggccgggatgaagaacttcctggagggccgggggaggatgctcttcctggttccg
ctggtcgcgcttgcgaaccagaagtaccagcggttccgggaccgatacggtcaccttgtc
cgtgtcgccctccaggtaggggtgagccgtctcaacctcccggagacccggccggccggc
gaccgtgacgtcaatgctccagtggtggtcgggacatacgagggtatagaccacctcctc
aggacggggaagactctgaaggatatcgggacggtcgtgatcgatgaggtccagatgctc
gaggacgcggagcgcggccaccgtctcgacgggctgatcgcacgtctcaagtatatcgcc
cctgacgcacagttcctctacctctcggcaacgatcggggcacccgggctgctggcagag
aaactcggggcgaaccttgtccgctacgcggaacggccggttccgcttgagcgccacctc
atatttatcgagcgggagaagaagatcgcgttcataaagcagatggtcgccgaggagtac
cggatgcggtcttcgaagggctaccgggggcagacgatcgtctttacaaactcgcgggct
cgctgccacgtcatcgccgacgccctgggtaagatggctgtgccataccatgcggggttg
agcgcccaggagcgccgggaggtcgagcggcggttctcaaatggggaggttgccgctgtc
gtgaccacggcagcgcttgctgccggtgtggatttcccggcgtcccaggtgatctttgat
gcgcttgcgatggggatccagtggctgaccgtccaggagtttcaccagatgatgggccgg
gccggccggccggacttccacgaccttggccgggtggtcatcctggcggagcccggcggg
tcttactccaggacgtccgggaagaccgaggaggaggttgccatcgccctcctgcggggc
gagatggaggaggtcgcgccggagtatgacctggaacagagcaccgaggagttcgtcgca
aacgccgttgtctgcgacggcgacgagcagcagatcatccggatgaaccgcatgatggtc
gggacgctggaacccgccctcccgacactccttgactacggactggtcaggcggcgggga
gggcgtatcgaactcaccgatatggctcgagtgatggcagagcacttcatcggtgctgag
cggttgatccagatcagggaccttgtccgccgggcggacgatgcggcctggatcgtggcg
gaactcgagtgcgccgtcgatgaggagcggtag
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