Methanoculleus receptaculi: R6Y96_04215
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Entry
R6Y96_04215 CDS
T09536
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mrc
Methanoculleus receptaculi
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrc03019
]
R6Y96_04215
Messenger RNA biogenesis [BR:
mrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R6Y96_04215
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
WOX58447
UniProt:
A0AAX4FX20
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All DBs
Position
complement(795165..796133)
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AA seq
322 aa
AA seq
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MLATVVEKNVFVGEITGGVPVDAPFVVDSAEVREKKDGGKYIHLTISDRSGRGACKVWGT
GSQSAEEIEAFCRGIRQGEVYRITGYAKVYNGTCEVNVNEGIFSLAEPLPLEGIEPSLFV
YAPVETAAVRQGLARMAAMIGDPGISSLVGRVLEETPGFFEAPAAKRRHHACTGGLAEHT
LETAENAVALAGSVRRAAMDTDVILAGALLHDVGKASCFRRQGFSFVALPEYTLVGHTAI
GAAAVMRHADGVDPARFAHILHIIMSHHGPHGEIQPRTPEAWTVHFADNASAVLRGICDD
TTDLAPGEGRHGGRFGGAVYRF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggccactgtggtcgagaagaatgtctttgtcggggagataaccggcggtgtcccg
gtcgacgcaccattcgttgtggattcggcagaggtccgggagaagaaggacggcgggaag
tacatccacctcaccatatccgaccgcagcggccggggagcctgcaaggtctgggggacg
gggagccagagcgccgaagagatagaggcgttctgccgcggtatcaggcagggcgaggtc
taccgcatcacgggctacgcgaaggtctacaacggcacgtgcgaggtcaacgtcaacgag
ggcatcttctccctggcagaacctctgccgctggaggggatcgagccctccctcttcgtc
tacgcccccgtagagaccgccgccgtccgccaggggctggcacgcatggccgcgatgatc
ggcgaccccggcatctcctctctcgtcggccgggttcttgaggagacgccggggttcttc
gaagccccggcagcgaaacggcgccaccacgcctgcaccggcgggcttgccgagcacacc
cttgagaccgcggagaacgcggttgcactggcgggaagcgtcaggcgggcggcgatggat
accgatgtcatcctcgccggcgccctcctccacgatgtcgggaaagcctcctgtttccgg
cgccaggggttctcgttcgtcgctctccccgaatacaccctggtcgggcacaccgcgatc
ggggccgccgcggtcatgcggcacgccgacggcgtcgaccctgcacggttcgcgcacatc
ctccacatcatcatgtcgcaccacggaccccacggtgagatccagccccggacaccggag
gcctggacagtccacttcgctgacaacgcaagcgccgtcctccgcgggatctgcgacgat
accaccgacctcgcccccggagaggggcggcacggcgggaggttcggcggcgcggtctac
cggttctga
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