Methanoculleus receptaculi: R6Y96_05875
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Entry
R6Y96_05875 CDS
T09536
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mrc
Methanoculleus receptaculi
Pathway
mrc03022
Basal transcription factors
mrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R6Y96_05875
09124 Replication and repair
03420 Nucleotide excision repair
R6Y96_05875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrc03021
]
R6Y96_05875
03036 Chromosome and associated proteins [BR:
mrc03036
]
R6Y96_05875
03400 DNA repair and recombination proteins [BR:
mrc03400
]
R6Y96_05875
Enzymes [BR:
mrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
R6Y96_05875
Transcription machinery [BR:
mrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R6Y96_05875
Chromosome and associated proteins [BR:
mrc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
R6Y96_05875
DNA repair and recombination proteins [BR:
mrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R6Y96_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
AAA_22
AAA_16
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOX56849
UniProt:
A0AAX4FSJ8
LinkDB
All DBs
Position
complement(1141397..1143406)
Genome browser
AA seq
669 aa
AA seq
DB search
MDSLDDWFPYREYRPHQREMLEVVASTARSGGIAMIDAPTGSGKSSVVAALLSESRGRKV
LVAVRTISQLTTFMRELQLIRQKRGSLKFAYLIGKSSMCPLGGEGDVYRRCEGVKALSTA
LMRERAQKGSLVPANDRQIRQQIRKIDPEHPLICPYFIHSKSFTEPEDGGLKMVASRALR
VRAERVSTEFIPPEHLAGFCGEVCPYDTMVYAARDADVVLLNFYHLFDDTIREQIYQSLG
IEAQDVLLLIDEAHNCGEVAQSIESVTIEERDIQQAGHELSGRGRSKPSDAIAQILPRIS
QFMEALKDSHEAEDWFDPGIFQRMILTGSLYQSTEEIVDDLLKISEGIREKNMQAGEFRE
SAIERLTAFFYRILRSASDPAYLTVYRKGEDGSVALEVRNIDPGTKLQEIAGAHACCVLI
SGTLSPIESYRRYYFGDLPVTTISLPNAFPPENRRILCAEDITTAYSMRRNTQNLARTED
YIITFARIPGNLAVYFPSYDLLNNFAERCANRIRSKRIYIESRNAQESASMLREFMNLPG
TGTFGIIFAVCGGKWSEGLDYRGEMLAGALVIGLPLAPFNRVRRMVIDYFRMKFGDEGEF
ISYTLPAINRALQALGRVLRTPEDRGMLVLGERRFLESRVHAALPPWMQEEMTPCTIETF
KEEVKRWRS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggactctctcgacgactggttcccctaccgtgaataccgcccccaccagcgggagatg
ctcgaggtggtcgcatcaaccgcacgcagcggcggcatcgccatgatcgatgcgccgacc
gggagcggcaaatcgagcgttgtcgctgcgctcctctcagagagccgggggcgaaaggtg
ctcgtcgcggtcaggactatcagtcaactcacaacattcatgcgcgaactccagctcatc
cggcagaaacgcggcagcctcaagtttgcctacctgatcggcaaatccagcatgtgcccc
ctcggcggcgaaggtgacgtataccgccgttgtgaaggtgtaaaagccctctcgacagcg
ctgatgcgggaacgggcgcagaaaggttcgctcgtcccggcaaacgaccgccagatcaga
cagcagatccgcaagattgaccccgaacatcccctcatatgcccttacttcatccacagc
aaatcgttcaccgaacccgaggacggcgggctcaagatggtcgcctccagggcgctccgg
gtccgggccgaacgggtgagcaccgagtttatcccgccagagcaccttgcagggttctgc
ggtgaagtctgcccctacgacaccatggtctacgctgcccgggacgccgacgtggtgctt
ctaaacttctaccacctcttcgacgacaccatccgtgaacagatctaccagtcgctcggg
atcgaggcgcaagacgtcctcctcctcatcgacgaggcgcacaactgcggagaggtcgcc
cagagcatcgagagcgtgacgatcgaggagcgcgacatccagcaggccggccacgaactc
tccggccgggggcggtcgaaaccgtcggatgccatcgctcagatcctgccccggatcagc
cagttcatggaagcgctcaaggactcccacgaggcggaggactggtttgaccccggcatc
ttccagcggatgatcctcaccggcagcctctaccagagcaccgaagagatcgtggacgac
ctcctcaagatcagcgaggggatccgcgaaaagaacatgcaggccggcgagttccgggag
agcgcgatcgagcggctgaccgcgttcttctaccggatcctccgttccgcatccgacccc
gcctacctcaccgtctaccggaagggagaggacggaagcgtagcgcttgaagtccgaaac
atcgaccccggcacaaaactccaggagatcgccggggcgcacgcctgctgcgtcctcatc
tccggcacgctctccccgatcgagagttaccgccgctactacttcggtgacctccccgtc
acaacgatatccctcccgaacgcctttccgccagagaaccgccgcatcctctgcgcagag
gacataaccaccgcctactccatgcgccgcaacacccagaacctcgcgcggacagaagac
tacatcatcacgttcgcccgtattcctggaaacctggcggtctacttcccctcctacgac
ctgctcaacaactttgctgaacgctgcgcaaaccggatccgcagcaaaaggatctacatc
gagtccagaaacgcccaggaatcggcctcaatgctccgggagttcatgaacctccccggc
accggcacctttgggatcatcttcgccgtctgcggcggcaagtggagcgagggtctggac
taccgtggcgagatgcttgcgggcgccctcgtcatcggcctcccgctcgcgcctttcaac
cgtgtccgcaggatggtgatcgactacttcaggatgaagtttggtgatgagggagagttc
ataagttacaccctcccggcgatcaaccgcgcccttcaggcgctcggccgggtgctccgg
acaccggaagacagggggatgctggttctcggggagaggcggttcctcgaatcacgggtt
cacgccgcactgccgccctggatgcaggaggagatgaccccctgcaccatcgagaccttc
aaagaggaggtaaagagatggcgatcctga
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