Methanoculleus receptaculi: R6Y96_06345
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Entry
R6Y96_06345 CDS
T09536
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mrc
Methanoculleus receptaculi
Pathway
mrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
R6Y96_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrc03019
]
R6Y96_06345
03009 Ribosome biogenesis [BR:
mrc03009
]
R6Y96_06345
04131 Membrane trafficking [BR:
mrc04131
]
R6Y96_06345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrc04147
]
R6Y96_06345
Messenger RNA biogenesis [BR:
mrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
R6Y96_06345
Ribosome biogenesis [BR:
mrc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
R6Y96_06345
Membrane trafficking [BR:
mrc04131
]
SNARE
SNARE associated proteins
Others
R6Y96_06345
Autophagy
Aggrephagy
Other aggrephagy associated proteins
R6Y96_06345
Exosome [BR:
mrc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R6Y96_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_22
TIP49
AAA_14
AAA_5
AAA_33
AAA_28
nSTAND3
NPHP3_N
AAA_lid_PRS2_C
RNA_helicase
Parvo_NS1
Mg_chelatase
AAA_24
DUF815
AAA_7
AAA_18
IstB_IS21
ATPase_2
AAA_17
ABC_tran
Sigma54_activat
AAA_3
NB-ARC
TsaE
ATPase
SLFN-g3_helicase
Zeta_toxin
AAA_19
bpMoxR
Zot
Motif
Other DBs
NCBI-ProteinID:
WOX56936
UniProt:
A0AAX4FSM2
LinkDB
All DBs
Position
complement(1241320..1243752)
Genome browser
AA seq
810 aa
AA seq
DB search
MTNNNSIEVTVKEAAHEDVGRGIARLSLDAMKALNLVSGDVIEIEGRQKAATLVWPGFPQ
DTGKAVLRIDGNTRGNVGAGIDDKVRIRKIEAGYAKKVVIQPTQPIRLVGGEQYLGRLLR
GRPVTEGQLIRINILGNPLTFAVAKVLPKGVAIVTDSTEIELKETPYEPAKAPKRGREIA
GDIHYEDIGGLDRELQLVREMIELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAV
ANEVDAHFITLSGPEIMSKYYGESEERLREVFEEAQENAPSIIFIDEIDAIAPKREEVKG
EVERRIVAQLLALMDGLKSRGQVVVIAATNLPDLIDPALRRGGRFDREIEIGIPDTKGRL
EIFQIHTRGMPLADDVDLEEYARTTHGFVGADIALLAKEAAMHALRRVIPQIKIEEEIPA
EIIEQLRVTNEDFIEAHKHVEPSAMREVLVEVPDVKWEDVGGLEDVKQELSEAIEWPLKY
PEAFSALDTKPPRGILLYGPPGTGKTLLAKAVANESECNFISVKGPELLSKWVGESERGV
RQIFRKARQAAPSIIFFDEIDALVPKRGTYMGSSHVTESVVSQILTELDGLVELKNVMVL
GATNRPDMLDEALLRPGRLDRVIYVPPPDRESRKKIFEVYLRNKDILAKDVNIDELVDRT
EGYVGADIEALVREAKLAAMREFITAMGEKSEEERRQAIGNVRITKKHFEEALGRVKGTL
DLEHLEDYERQAWKFLYNQEQRSLLEEASSMIKRARLQETDKTEQEVKDLTSALKNAVYA
RKKDFGEIKRLTEDLKKKLERPMAQMGTAF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataataattccattgaagttacagtcaaagaggcggctcatgaagacgtaggc
cggggaattgccaggctgagtcttgacgccatgaaggcgctcaatctcgtcagcggcgat
gttatcgagatcgaggggcgccagaaagcggcgacactggtctggccgggtttcccccag
gatacgggaaaggcggtccttcgtatcgatggaaacacccgcggcaacgtcggggccggc
atcgacgacaaggtccggatcagaaagattgaggcaggatacgcaaagaaggtcgtcatc
cagcccacccagcccatacgcctggttggcggcgagcagtacctcgggcggctcctccgc
ggccgtccggtcaccgaggggcagctcatccggatcaacatcctgggcaacccgctcacg
ttcgcggtcgccaaggtgttaccgaagggcgtggccatcgtcaccgatagcaccgagatc
gaactgaaggagacaccctacgaaccggcgaaggcaccaaaacgcggtcgtgagattgcg
ggcgacatccactacgaggacatcggtggtctggaccgcgagctgcagctcgtccgtgag
atgatcgagctcccgctgcgtcaccccgaactcttcgagcgtctcgggatcgagcctcca
aagggtgtcctcctctacggcccgccgggcacgggtaagacactgatcgcaaaagcggta
gcaaacgaggtggatgcgcacttcatcaccctctcgggtcccgagatcatgagcaagtac
tacggcgagtccgaggagcgcctgcgtgaggtctttgaagaggcacaggagaacgcgcct
tcgatcatcttcattgatgagatcgatgcgatcgcacccaagcgtgaagaggtaaaagga
gaagtggagcggcggatcgttgcccagctcctcgcactgatggacgggttgaagtcccgc
gggcaggtggtggtgatcgccgcaactaacctgcctgacctgatcgaccccgcactcagg
cgcggcggccggttcgaccgtgagatcgagatcgggatcccggacacaaagggcaggctg
gagatcttccagatccacacacgcggcatgccgcttgcagatgacgtggatctcgaggag
tatgcccgaaccacacacggtttcgtcggtgccgatatcgctctgctcgcaaaggaggca
gcgatgcacgctctccgccgtgtcatcccccagatcaagatcgaggaggagatcccggcc
gagatcatcgagcagctccgcgtgacaaacgaggatttcatcgaggcgcacaagcacgtt
gagccaagcgctatgcgtgaggtgctcgttgaggtcccggacgtcaagtgggaggatgtt
ggaggcctcgaagatgtcaagcaggagctttctgaagccattgagtggccgctcaagtac
cccgaggccttctcagccctggacaccaaaccgccacgtggcatcctcctctacggcccg
ccgggcacgggtaagaccctgcttgcaaaagcggttgcaaacgagagtgagtgcaacttt
atctctgtcaaaggcccggaactcctctcgaagtgggtcggggaatcggagcgcggtgtg
cgtcagatattccggaaagcacggcaagcggcaccgtcgatcatattcttcgacgagatt
gatgctctggttccgaaacgcggaacgtatatgggctcatcccatgtgaccgagagcgtt
gtaagccagatcctgacggagctcgacggtcttgtggagctcaagaacgtcatggttctt
ggcgctaccaaccgcccggacatgctggatgaggcgctgcttcgccccggcaggcttgac
agggtcatatacgtcccgccgccagacagggagagcaggaagaagatctttgaggtctac
ctccggaacaaggatatactggcaaaagacgtcaacatcgacgaactggtcgataggacg
gaggggtatgtcggtgctgacatagaggcgctcgtccgcgaggcgaaactggccgcaatg
cgcgagttcatcactgcaatgggcgaaaagagtgaggaggagcggcgccaggcgatcggc
aacgtcaggatcacgaagaagcacttcgaggaggccctcggccgcgtgaagggcacgctc
gatctcgaacacctggaagattacgagcgccaggcctggaagttcctctacaaccaggag
cagcggtcgctgctcgaggaggccagctcgatgatcaaacgtgccaggctgcaggagacc
gacaagaccgaacaggaagtcaaagatctcacaagcgccctcaaaaatgcggtatacgca
aggaagaaggactttggcgagatcaagcgcctcacagaggacttgaagaagaaactggaa
cgtccgatggctcagatgggcacggccttctga
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