Methanoculleus receptaculi: R6Y96_06585
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Entry
R6Y96_06585 CDS
T09536
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mrc
Methanoculleus receptaculi
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrc03016
]
R6Y96_06585 (truD)
Enzymes [BR:
mrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
R6Y96_06585 (truD)
Transfer RNA biogenesis [BR:
mrc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R6Y96_06585 (truD)
Prokaryotic type
R6Y96_06585 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WOX56979
UniProt:
A0AAX4FSU4
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All DBs
Position
complement(1292185..1293456)
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AA seq
423 aa
AA seq
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MMPSTYPLERDLGMRYYASETPGIGGRLRSTPADFVVEELPLPIPDQEGPYLICRLTKTS
WELQRAVREIARHLGLSHRRISWAGTKDKNAVTTQFISIYDVPPEAVEGVHLKDISLEVV
GRSQHPLSLGSLAGNRFEIVIRECLIEDLPARVQTVTEAVSAGVPNYYGVQRFGVIRPVT
HIVGEKILKGDYEGAVAAYIGRAYPMEPLDVQQARTRFLETGDARAALADLPVRLTYERA
MANHLAANPGDYAGALRVLPPKLLSLFVSAFQSCLFNHALSARIDAGLQLNEPEIGDRLL
FENGREDVVTARNHQAARIQIRRGRCRIALFIPGAEPVRVYGPMDDIMRDLVQRRGIEAA
DFERASRFVETAFSGALRAISLSSNVEAQVSGTDVRLRFSLPPGHYATTVCREYMKAEPY
LMI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctcaacctaccccctcgaacgcgatctcgggatgcgctactacgcctcggag
accccggggatcggcggccgactccgttcaacccccgcagacttcgtcgtcgaggaactc
cctcttccaatccccgaccaggaagggccctacctcatatgccggctcaccaagaccagc
tgggaactccagcgggcggtcagggagattgcaaggcatcttggtctcagtcaccgccgg
atctcctgggcgggaacgaaggacaagaacgcggtgacaacccagttcatatccatctac
gacgtccccccggaggcggtcgagggggtgcacctcaaggatatctctctcgaggtcgtg
gggcggtcacaacacccgctcagtctcgggagccttgcgggcaaccggtttgagatcgtt
atcagggagtgtctcatagaggatcttccggcacgggtgcagacggtcacggaggcggtc
tctgcaggggtacctaactactacggggtgcagaggttcggcgtaatccggccggtcacc
cacattgtcggtgagaagatactcaagggagattatgagggtgctgttgccgcatacatc
ggccgggcatacccgatggagcccctggatgtccagcaggcgcgaacgcggtttctcgag
acgggagacgcacgagcggcgcttgccgaccttcccgtaaggctgacctacgagcgggcg
atggcaaaccatctggcagcaaaccccggcgactacgccggcgcgctccgggttctcccg
ccgaaactcctctcactctttgtgagcgcgttccagtcctgcctcttcaaccacgctctc
tccgcccgcatagatgccggtctccagctcaacgaacccgagatcggcgaccgactcctc
tttgaaaacgggcgggaggatgttgtcacggcgcggaaccaccaggcggcccgaatccag
atccggcgcggacgctgccggatagccctcttcatcccgggtgctgaaccggtgagagtg
tacgggccgatggacgatatcatgcgcgacctggtgcagaggcgcggtatcgaggccgcg
gactttgaacgcgcctccaggtttgtggagacggcgttctcgggggctctacgcgcgata
agcctgtcgagcaacgtggaggcacaggtctctggcaccgacgtccggctacggttcagc
ctcccgcccggtcactacgcaacgactgtatgccgggagtacatgaaagccgagccatat
ctgatgatataa
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