Methanoculleus receptaculi: R6Y96_07380
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Entry
R6Y96_07380 CDS
T09536
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrc
Methanoculleus receptaculi
Pathway
mrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R6Y96_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrc03019
]
R6Y96_07380
03400 DNA repair and recombination proteins [BR:
mrc03400
]
R6Y96_07380
Enzymes [BR:
mrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R6Y96_07380
Messenger RNA biogenesis [BR:
mrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R6Y96_07380
DNA repair and recombination proteins [BR:
mrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R6Y96_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
WOX57119
UniProt:
A0AAX4FTA7
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All DBs
Position
1435276..1436496
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AA seq
406 aa
AA seq
DB search
MDRLHLILERYFGYQAFYPYQREIIQDLLAGRDVLAVLATGAGKSLCYQVPAVLGDGVTL
VVSPLIALMKDQVDSLQARGIGAATLNSSTTYAARRRTLAELEEGSVQVLYVSPERAVSE
DFLEFIATLHLNLIAVDEAHCISMWGHQFRPEYRALAVLKERFPSVPMVALTATATPDVR
QDIVRQLRLADPAVYVGSFNRENLRYVVVRKNGDAFRRLRDYLLMRRGEAGIVYLATREG
AREIAGGLRADGIPAEPYHAGMAASARGETHDRFARGEAVVVCATSAFGMGIDRPDVRFV
VHYDIPETLEAYYQESGRAGRDGRPADCILFYDEGDARRLRSFIDRDLASDFQREVARSK
LQGMVDYCTTRRCRRRFLLDYFGERLDAPCGGCDICAPGGDRCFMQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatcggctgcacctgatcctggaacgctacttcgggtatcaggcgttttacccatac
cagcgcgagatcatccaggatctccttgcgggccgcgatgtcctggcggttcttgcaacg
ggggccgggaaatcgctctgctaccaggttcccgcagttctcggtgatggggtaaccctg
gtggtctctccccttatcgccctgatgaaggaccaggtcgacagcctgcaggcgaggggg
atcggcgcggcaaccctgaactcctcgaccacctacgcggccaggcggcggacgcttgcc
gaactcgaggagggttctgtccaggtcctctacgtatcgccggagagagcggtcagcgag
gattttctcgagttcatcgcaactctgcacctcaacctgatcgcggtcgacgaggcgcac
tgcatatcgatgtgggggcaccagttccgtccggagtaccgggcgcttgccgtcctcaag
gagcgtttccccagcgtgccgatggtcgccctgacggcgaccgcaacgccggatgtccgc
caggatatcgtgcgccagctcaggctggcggatcccgccgtttatgtcgggagtttcaac
cgcgagaacctccgttacgttgttgtccggaaaaacggcgatgccttcaggcggctccgc
gattacctgcttatgcgtcggggcgaggccgggatcgtatacctggcaacccgcgagggg
gcgcgtgagattgcgggcggtctccgcgctgatggtatcccggcggaaccttaccacgcc
ggtatggcggcctccgctcgtggggagacgcatgatcggttcgccaggggggaggcggtg
gtcgtctgcgcgacaagcgcgtttggcatgggtatcgacaggccggatgtgcggtttgtc
gtccactacgatataccggagacgcttgaggcctactaccaggagagcggtcgggccggg
agggacggcaggccggctgactgtattctcttctacgacgaaggggatgcacgccgcctc
aggtcgttcatcgaccgcgacctggcttctgacttccagcgcgaggtcgctcgctcgaaa
ctccaggggatggtggattactgcaccaccagaagatgccggaggaggtttctcctggac
tattttggtgagcggctcgatgcgccctgcggaggctgcgatatctgtgctccgggcggg
gatcgctgcttcatgcaataa
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