Methanoculleus receptaculi: R6Y96_07805
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Entry
R6Y96_07805 CDS
T09536
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mrc
Methanoculleus receptaculi
Pathway
mrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R6Y96_07805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrc03021
]
R6Y96_07805
Transcription machinery [BR:
mrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
R6Y96_07805
Prokaryotic type
Archaeal type
TFB
R6Y96_07805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_SprT
Zn_ribbon_LysW
Ribosomal_S27e
HTH_AsnC-type
Cas12f1-like_TNB
DUF5817
Trm112p
UPF0253
A2L_zn_ribbon
LUC7
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
WOX57202
UniProt:
A0AAX4FTE1
LinkDB
All DBs
Position
1518469..1519482
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AA seq
337 aa
AA seq
DB search
MAEVEKLKQLQLQREALKKREEQKVKETEKTRPEESVESVCPECGSHQLVHDYERAELVC
QSCGLVLDGEFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRA
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDA
VEKNLIRGRSIEGVAAASLYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLK
LLPTSPIDYVPRFCSGLNLNGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILG
GERRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtggaaaagttaaaacaactgcagttgcagcgcgaggcccttaaaaaaagg
gaggagcagaaagtcaaggagaccgagaagacgcgccccgaagagagtgtggagtccgtc
tgcccggagtgcggcagccaccagcttgtccatgactatgagcgtgctgaacttgtatgt
cagagttgtggtcttgtcctcgacggggagttcatcgaccgcggtcctgagtggcgggcg
ttcgaccacgaccaacgcatgaagaggtcacgtgtcggtgcgccgatgaccttcaccatc
cacgacaagggtctctcgacgatgatcgactggaggaaccgggattcatatggccgcgct
atctcaagcaagaaccgggcgcagctctaccgcctcaggaagtggcagcggcgtatccgg
gtctcaaacgccacagagcggaacctggcgttcgccctctcggaactggatcggatggcc
tcggctcttggtctgccgaggaacgtgcgcgagaccgccgcggtcgtctaccgtgacgcc
gtggagaagaacctgatccgcggccggagtatagagggcgtagcggcggcgtcgctgtac
gcggcgtgccgccagtgcagcgttcctaggacactcgatgagatcgccgaggtctcccgt
gtctcgaggaaggagatagggcgtacctacaggttcatctcacgcgagctcggccttaaa
ctcctgccgacgtcgccgatcgactacgtaccgcgcttctgctcggggctgaacctgaat
ggcgaggtccagagccgggcggtcgagatcctccggcaggcaggcgaacgcgaacttacg
agcggcaggggcccgacgggtgttgcagcggccgcaatttacatctcctcgatcctgggc
ggcgagaggcgcacccagcgcgaggtggccgaggtggccggcgtgaccgaggtcacgatc
aggaacagatataaggaactggcagagaagttagatatcgagatcatactctga
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