Methanoculleus receptaculi: R6Y96_08490
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Entry
R6Y96_08490 CDS
T09536
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrc
Methanoculleus receptaculi
Pathway
mrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R6Y96_08490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrc03019
]
R6Y96_08490
03009 Ribosome biogenesis [BR:
mrc03009
]
R6Y96_08490
Enzymes [BR:
mrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R6Y96_08490
Messenger RNA biogenesis [BR:
mrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R6Y96_08490
Ribosome biogenesis [BR:
mrc03009
]
Prokaryotic type
rRNA helicases
R6Y96_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
CMS1
Hyccin
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WOX57329
UniProt:
A0AAX4FTW8
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All DBs
Position
1655632..1657209
Genome browser
AA seq
525 aa
AA seq
DB search
MDKNTRFQDFNISPETLHAIEEMGFEEPTPIQVSAIPALLEGRDVTGQAQTGTGKTAAFG
IPAIERIDPRSRKTQVLVLSPTRELAIQIAEEFARLAACHEGINILPIYGGQPIERQFRA
LERGAQIVVGTPGRILDHLDRGTLSFDSVRLVVLDEADQMLDMGFRDDIEAILNETPADR
QTVLFSATLPKPILEISKRFQKDPAFISVARREVTVPQIEQLYLEVRSRDRLEILTRVLD
LYDPDLTLIFANTKKGVDELTSHLQARGYFAEGLHGDMKQVLRDRVMAKFRSRTIDILVA
TDVAARGIDVDNVDLVINYDVPQDIDYYIHRIGRTARAGKTGRAITFVGPKDYFKLRMIQ
DYTRIKIARIPLPTPGDVEESRTRKLIERVKHTINEGSLDRYINIVERIVAEDYTSLEVA
AALLKQEIAGAAQGQPQDLRPGTALLRIPTGRLHQIRPKDIVGALAGETGIPGNAIGAIN
IYETHSTVEVPERLVGQVIEGMKGKSIGRVRLDQPIEIAGTSGGQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggataagaataccagattccaggacttcaatatctcgccagaaaccctccacgccatc
gaagagatggggtttgaggagccgacccctatacaggtcagcgccatcccggcattgctc
gaaggccgcgacgtcaccggccaggcccagacaggcaccggcaagacagcggcgtttggc
atccccgcgatcgagcgcatcgacccccggagccgaaagacccaggttctggtcctctcc
cccacccgcgaactcgccatccagatcgcagaagagttcgcccggctggcagcctgccac
gaggggatcaacatcctcccgatctacggcggccagccaatcgaacggcagttccgggcg
ctggaacgcggcgcccagatcgttgtcggaacgccgggccggatcctcgatcacctcgac
cgcggcacactctcctttgactccgtaaggctcgtcgtcctggacgaagccgaccagatg
ctcgatatgggtttcagagacgatatcgaggccatcctgaacgagaccccggcagaccgc
cagaccgtcctcttctcggccaccctcccaaaaccaatacttgagatctcaaaacggttc
cagaaagaccccgcgttcatatcggtcgcacgccgggaggtgaccgtcccccagatcgag
cagctctaccttgaggtgcgaagccgcgacaggctcgagatcctcacacgcgtcctcgac
ttatacgaccccgacctcaccctgatcttcgcaaacaccaaaaaaggcgtcgacgaactc
acctcccacctccaggcccggggctactttgccgaagggctccacggcgacatgaaacag
gtgctgcgtgaccgcgtcatggcaaagttccgttcccggacgatcgatatccttgtcgcg
acggacgtcgccgccagagggatagacgtcgacaacgtcgacctggtcatcaactacgac
gtcccccaggacatcgactactacatccaccgcatcggcaggacggcacgggcagggaag
accggccgtgccatcaccttcgtcggcccgaaagactacttcaaactccggatgatccag
gactacaccaggatcaagatcgcacgcatcccgctccccacccccggcgacgtcgaagag
agccggacacgcaaactcatcgagagggtgaaacacaccataaacgaaggcagtctcgat
cgctacatcaatatcgtcgagcggatcgtcgccgaggactacacctccctcgaggtcgcc
gccgccctccttaaacaggagatcgccggggcagcccagggtcagccacaggacctccgg
ccgggaaccgccctcctccggatacccacgggaagactgcaccagatccggccaaaagac
atcgtcggggcgctcgccggcgagaccgggatccccgggaacgccataggggctatcaac
atctacgagacccactcaaccgtcgaggtacccgagaggctcgtcggccaagtcatagag
gggatgaagggaaagagcatcggcagggtcaggctggaccagcccatcgagatcgcggga
acttcgggcgggcagtga
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