Methylobacterium radiotolerans: Mrad2831_2797
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Entry
Mrad2831_2797 CDS
T00674
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mrd
Methylobacterium radiotolerans
Pathway
mrd03410
Base excision repair
mrd03430
Mismatch repair
mrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mrad2831_2797
03430 Mismatch repair
Mrad2831_2797
03440 Homologous recombination
Mrad2831_2797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrd03400
]
Mrad2831_2797
DNA repair and recombination proteins [BR:
mrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mrad2831_2797
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mrad2831_2797
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mrad2831_2797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACB24781
UniProt:
B1M365
LinkDB
All DBs
Position
complement(2936209..2938026)
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AA seq
605 aa
AA seq
DB search
MSSAPLLAELPPFLGVAASVTGRRWQERCGGAAVQNQIAKMVQAHGLPELLARVLAGRGI
VPEAAPRHLAPRLRDLMPDPDTLLDMEAAVRRLVRAVKRGETVAVFGDYDVDGAASAALL
AGYLRNLGLRAPIHIPDRITEGYGPNVAAITALAAEGATLLVCVDCGTSGHAPLEEAEKF
GLDVIVLDHHAASEILPPARAVVNPNRLDDLSGLGHLCAAGIVFLTLVALNRALRQEGFF
GSHRPEPQLTDALDLVALATVADVVPLTGLNRAFVTQGLTVMRHRGRTGLAALLDAASLG
EPPEAWHLGFVLGPRINAGGRIGDSALGARLLTTADPGEAARIAADLDRLNRERQAIEAQ
AVLEAEAEMDRALTLDPDRTVLVTASADWHPGIVGLIASRLKERFNRPAFAFAIRPDGTA
TGSGRSIPGADLGLAVRACVEARLASKGGGHAMAAGVTVRADDIPRFEAHLAMLLGASVA
VARAADALLIDGGLSAGGATAETVRLLQRAGPFGQGAPEPIFALGRHRLVDAGVVGSSHV
RARLRSRDGQVVGAICFRAAERPLGLALLNGIGREMHVAGTLSCDRWRGAERAQLRIVDL
APSES
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtccgctccgctcctcgccgaactgccgcccttcctgggtgtcgccgcctccgtg
accggtcggcgctggcaggagcgctgcggcggcgcggccgtccagaatcagatcgccaag
atggtccaggcccacggcctcccggagttgctggcccgggtcctggcgggacggggcatc
gtcccggaagcggcgccccgtcacctcgcgccgcggctgcgggacctgatgccggatccg
gacacgctgctcgatatggaggcggccgtccgccgcctcgtccgcgccgtgaagcgcggg
gagacggtggcggtgttcggcgactacgatgtcgacggcgccgcgagcgcggcgctcctc
gccggctatctccgcaacctgggactgcgcgcgccgatccacatccccgaccggatcacc
gagggctacggccccaacgtcgcggcgatcaccgcgctggcggcggagggcgcgacactc
ctcgtctgcgtcgattgcgggacgagcggccacgcgccgctggaggaggccgagaaattc
ggtctcgacgtcatcgtcctcgaccaccacgcggcctccgagatcctcccccccgcccgc
gccgtggtcaatccgaatcgcctcgacgacctgtcgggtctcggccatctctgcgccgcc
ggcatcgtcttcctgaccctggtggcgctgaaccgcgccctgcggcaggagggcttcttc
ggcagccatcgtcccgaaccgcagctcaccgatgccctcgacctcgtggcgctggcgacc
gtggccgacgtcgtgcctctaacgggcctcaaccgggccttcgtgacccaggggctcacg
gtcatgcgccatcgcggccgcaccgggctcgcggcgctgctggacgcggcctcgctcggc
gagcctccggaagcgtggcatctcggcttcgtgctcgggccgcgcatcaatgccggcggg
cgcatcggcgactcggccctgggcgcccgcctgctgaccacggcggacccgggcgaggcg
gcccggatcgccgccgacctcgatcgcctcaaccgcgagcgtcaggcgatcgaggcgcag
gccgtcctggaggccgaggccgagatggaccgggccctgacgctcgatccggaccgtacc
gtgctagtgactgccagcgccgactggcaccccggcatcgtcggcctcatcgcctcccgg
ctgaaggagcgcttcaaccggccggccttcgcgttcgcgatccgtccggacgggaccgcc
acgggctcggggcgctcgatcccgggcgcggatctggggctcgcggtccgcgcctgcgtg
gaggcccggctcgccagcaagggcggcggccatgccatggcggccggcgtgaccgtgcgg
gccgacgacatcccccgcttcgaagcgcatctggcgatgctgctcggggcgagcgtcgcg
gtggcccgggccgccgatgccctgctgatcgacggcggcctcagcgccggcggcgccacc
gcggagacggtccggctgctgcagcgggccggcccgttcggccagggtgcgcccgagccg
atcttcgcgctgggccggcaccgcctcgtcgacgccggtgtggtcggctccagccatgtc
agggcccggctgcgcagccgcgacgggcaggtggtgggagcgatctgtttccgcgccgcc
gaacgaccgctcggcctggccttgctgaacgggatcggccgggagatgcacgtggccggg
accctgtcctgcgaccggtggcgcggcgccgagcgcgcccagctccggatcgtcgatctg
gcgccgtccgaatcctga
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