Methylobacterium radiotolerans: Mrad2831_3809
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Entry
Mrad2831_3809 CDS
T00674
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mrd
Methylobacterium radiotolerans
Pathway
mrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mrad2831_3809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrd03019
]
Mrad2831_3809
Enzymes [BR:
mrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mrad2831_3809
Messenger RNA biogenesis [BR:
mrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mrad2831_3809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ACB25784
UniProt:
B1LY13
LinkDB
All DBs
Position
4052301..4053821
Genome browser
AA seq
506 aa
AA seq
DB search
MTQFTDFGLAQPVLRALSEAGYVAPTPIQAQAIPPAMEGRDLCGIAQTGTGKTAAFALPI
LHRLSLSDRRAPRRGCRVLVLSPTRELANQIAESFTDYGRHLSYTTTVVFGGVTISRQER
ALAPGVDILVATPGRLIDLVDRRSLTLEGVEILVLDEADQMLDLGFIHALKRIVKMLPEK
RQSLFFSATMPKNIAGLAAQYLTDPVQVAVTPVATTAERVEQEVIFVHTGAKQALLGHIL
RDPAIERVLVFTRTKHGADRVVRGLDKVGIAAAAIHGNKSQPQRERALAAFKDGSCRVLV
ATDIAARGIDVEGVSHVVNFDLPNVPESYVHRIGRTARAGADGLAISFCNDEEKAYLRDI
ERVTRQKVPVAGFPEGFTPPSRQEAAEIAREEERRPERPQQRPGGGRQGQRPRQQQGRPQ
QGRPQQGRPEGGRGFGGPGQGAPRQGRPQDGRDARADRPARPQGERPNQGRPNRDGRPQR
AEARPRSGGGGGEGRSIGWLERAPRS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaattcaccgatttcggcctcgcccagcccgtgctgcgggcgctcagcgaggcc
ggctacgtcgcgccgaccccgatccaggcccaggcgatcccgccggccatggagggccgc
gacctctgcggcattgcccagaccggcaccggcaagaccgcggccttcgcgctgccgatc
ctgcaccgcctctcgctctcggaccgccgcgccccgcgccgcggctgccgggtgctggtg
ctctcgccgacccgcgagctcgccaaccagatcgccgaatcgttcaccgattacggccgg
cacctgtcctacaccacgacggtggtgttcggcggcgtcaccatcagccgccaggagcgc
gcgctggcgccgggcgtcgacatcctcgtcgcgaccccgggccggctgatcgacctcgtc
gaccgccgctcgctgaccctggagggcgtcgagatcctcgtcctcgacgaggccgaccag
atgctcgacctcggcttcatccacgccctcaagcgcatcgtgaagatgctgcccgagaag
cgccagagcctgttcttctcggccaccatgccgaagaacatcgccggcctcgcggcgcag
tacctgaccgacccggtccaggtcgcggtgacccccgttgccaccacggccgagcgggtc
gagcaggaggtgatcttcgtccataccggcgccaagcaggcgctgctcggtcacatcctg
cgcgatccggcgatcgagcgcgtgctcgtcttcacccgcaccaagcacggggcggaccgg
gtcgtgcgcgggctcgacaaggtcggcatcgcggcggccgcgatccacggcaacaagagc
cagccgcagcgcgagcgggcgctggccgccttcaaggacggctcctgccgggtcctggtc
gccaccgacatcgccgcccgcggcatcgacgtcgagggcgtgagccacgtggtcaatttc
gacctgccgaacgtgccggagagctacgtccaccggatcggccgcaccgcccgcgccggc
gccgacggcctcgccatctcgttctgcaacgacgaggagaaggcctacctgcgcgacatc
gagcgcgtgacccggcagaaggtcccggtggcgggcttccccgagggcttcaccccgccg
tcccgccaggaggcggccgagatcgcccgggaggaggagcgccggcccgagcgtccgcag
cagcgccccggcggcggccgccagggccagcggccccggcagcagcagggccgcccgcag
cagggtcgtccccagcagggccggcccgagggcggccgcggcttcgggggtccaggccag
ggcgcaccccggcagggtcggccccaggatggccgcgacgcacgcgcggaccggcccgcc
cgcccgcagggcgagcgcccgaaccagggccgcccgaaccgagacgggcgtccccagcgc
gccgaggcccgtccgcgcagcggcggcggtggcggcgaggggcgcagcatcggctggctg
gagcgggcgccccgttcctga
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