Methylobacterium radiotolerans: Mrad2831_3838
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Entry
Mrad2831_3838 CDS
T00674
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mrd
Methylobacterium radiotolerans
Pathway
mrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mrad2831_3838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrd03021
]
Mrad2831_3838
03400 DNA repair and recombination proteins [BR:
mrd03400
]
Mrad2831_3838
Enzymes [BR:
mrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mrad2831_3838
Transcription machinery [BR:
mrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mrad2831_3838
DNA repair and recombination proteins [BR:
mrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mrad2831_3838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
RnfC_N
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ACB25813
UniProt:
B1LY42
LinkDB
All DBs
Position
complement(4082987..4087198)
Genome browser
AA seq
1403 aa
AA seq
DB search
MNQEVMNLFNQQAQPVSFDQIKISISSPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRDRMGHIELAAPVAHIWFLKS
LPSRIGLLLDMALKDLERILYFESYCVIEPGLTPLKERQLLSEEEYLRAQEEYGEDSFTA
MIGAEAIRRILQELDLDKIANDLREEIAVTTSELKPKKLLKRLKIIEAFQMSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIVAEGAPGEYKPDNAKNPMQGVYG
DMGELEHALAAKAVSLHSKIKWRWTGIGPDGEPLTKTYETTPGRVILSGALPKHAKVPFD
VVNKLMTKKEISAMIDTVYRHCGQKESVIFCDRIMALGFNHAFKAGISFGKDDMVVPENK
WSIVDTTRALVKDYEQQYNDGLITQGEKYNKVVDAWAKCSDKLAAEMMGRISSVQKDEKG
ADKQVNSIYMMSHSGARGSPAQMKQLAAMRGLMAKPSGEIIETPIISNFKEGLDVLEYFN
STHGARKGLADTALKTANSGYLTRRLVDVAQDAVIREVDCGTTSGIKMRAIVDAGQVVAT
LATRILGRATAEDLVAADGTVIVKTGETIEERHLPAINAAGIQEVKIRSVLVCATKSGVC
ATCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADSSFIESSFEG
TIKIRNRAVAKNTDGDLIATGRNVAVVIVGSDGVERAVHRLQYGAKLRVDEGDKIKRGQR
IAEWDPYTRPILTEVDGIVAYEDLVDGQSMTETTDESTGIAKRVVVDWRGSARTSDLKPA
MVVVDRDGKALKLPRGSDARYFLPVDAIIGFDPGATVKAGDILARVSTDSAKTRDITGGL
PRVAELFEARRPKDAAIIAEKSGTIAFGRDYKNKRRLTLTPHDGSEAVEYLIPKGKHIHL
QDGDVVELGDYIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVSINDKHIEVIVR
QMLQKVEVTDGGDSDILSGDQIDRTELTDYNEKLLAEGKKPIQGVPVLLGITKASLQTKS
FISAASFQETTRVLTEAAVNGKVDTLEGLKENVIVGSLIPAGTGSMVADIRSIARRRDAM
ILQQKQAESGAMPVEELPPAAAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaaccttttcaaccagcaggcccagccggtcagcttcgaccag
atcaagatctcgatctcgtccccggagaagatcctctcctggtcgtacggcgagatcaag
aagcccgagaccatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgcg
cgcatcttcggaccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaggtcaccctcgcgcgcgtccggcgc
gaccgcatgggccacatcgagctggccgcccccgtcgcgcacatctggttcctgaagtcg
ctgccgagccgcatcggcctgctgctcgacatggcgctcaaggacctcgagcggatcctg
tacttcgagtcgtactgcgtcatcgagccgggcctcacccccctgaaggagcgtcagctc
ctgtcggaggaggagtacctgcgcgcgcaggaggagtacggcgaggatagcttcacggcc
atgatcggcgccgaggccatccggcgcatcctgcaggagctcgacctcgacaagatcgcc
aacgacctgcgcgaggagatcgcggtcaccacctcggagctgaagcccaagaagctcctg
aagcggctcaagatcatcgaggcattccagatgtccggcaacaagccggaatggatgatc
ctgacggtcgtgccggtgatcccgccggacctgcgcccgctggtcccgctggacggcggc
cgcttcgcgacctccgacctcaacgatctgtaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgcccgacatcatcatccgcaacgagaagcggatg
ctgcaggaggcggtcgacgcgctgttcgacaacggccgccgcggccgcgtcatcacgggc
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactactcgggccgctcggtcatcgtggtcggt
ccggagctgaagctgcaccagtgcggcctgcccaagaagatggcgctggagctgttcaag
ccgttcatctacgcgcgcctcgacgccaagggtttctcggccaccgtcaagcaggccaag
aagctcgtggagaaggagaagccggaggtctgggacatcctcgatgaggtgatccgcgag
cacccggtgatgctgaaccgcgcgccgacgctgcaccgcctcggcatccaggccttcgag
ccgaagctgatcgagggcaaggcgatccagctgcacccgctggtctgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcacccggccaacggtcagccg
atcatcgtgccgtcgcaggacatcgtgctcggcctctactacctgtcgatcgtggccgag
ggcgcgccgggcgagtacaagcccgacaacgccaagaacccgatgcagggcgtctacggc
gacatgggcgagctcgagcacgccctggccgccaaggccgtgtcgctgcactcgaagatc
aagtggcgctggaccggcatcggcccggacggcgagcccctgaccaagacctacgagacc
acccccggccgcgtgatcctctccggcgccctgccgaagcacgccaaggtgcccttcgac
gtcgtcaacaagctgatgaccaagaaggagatctcggcgatgatcgacaccgtctaccgc
cactgcggtcagaaggagtcggtgatcttctgtgaccggatcatggcgctcggcttcaac
cacgcgttcaaggccggcatttcgttcggcaaggacgacatggtcgtgccggagaacaag
tggtcgatcgtcgacacgacccgcgcgctcgtgaaggattacgagcagcagtacaacgac
ggcctgatcacccagggcgagaagtacaacaaggtggtcgacgcctgggccaagtgctcg
gacaagctggccgccgagatgatgggccgcatctccagcgtccagaaggacgagaagggt
gcggacaagcaggtcaactcgatctacatgatgagccactcgggtgcccgtggctcgcct
gcccagatgaagcagctcgcggcgatgcgcggcctcatggccaagccgtcgggcgagatc
atcgagaccccgatcatctcgaacttcaaggaaggtctggacgtgctggagtacttcaac
tccacgcacggtgcccgtaagggcctcgccgacaccgcgctgaagaccgccaactccggc
tacctgacccgccgcctcgtcgacgtggcgcaggacgcggtcatccgcgaggtggattgc
ggcacgacgagcggcatcaagatgcgcgccatcgtggatgccggccaggtcgtggcgacg
ctcgccacccgcatcctcggccgcgccacggcggaggatctggtggccgccgacggcacg
gtgatcgtcaagaccggcgagaccatcgaggagcggcacctgccggcgatcaacgccgcc
ggcatccaggaggtgaagatccgctcggtgctggtctgcgcgaccaagagcggcgtctgc
gccacctgctacgggcgcgacctcgcccgcggcacgcccgtcaacatgggcgaggccgtc
ggcgtcatcgcggcgcagtcgatcggcgagccgggcacgcagctcacgatgcgcaccttc
cacatcggtggtgcggcccagatcgccgactcgtcgttcatcgagtcgagcttcgagggc
acgatcaagatccgcaaccgggccgtggccaagaacacggacggggatctgatcgccacc
ggccgcaacgtggcggtggtcatcgtcgggtcggacggggtcgagcgggcggtccaccgc
ctgcagtacggcgccaagctccgggtcgacgagggtgacaagatcaagcgcgggcagcgg
atcgccgagtgggatccctacacccgtccgatcctcaccgaggtggacggcatcgtggcc
tacgaggatctggtcgacggccagtccatgaccgagaccaccgacgagtcgaccggcatc
gccaagcgcgtcgtggtcgactggcgcggctcggcccggacctcggacctgaagcccgcg
atggtcgtggtcgaccgggacggcaaggcgctcaagctgccgcgcggctcggacgcccgc
tacttcctgccggtcgacgccatcatcggcttcgacccgggcgcgacggtcaaggccggc
gacatcctcgcccgcgtctcgactgactcggccaagacccgcgacatcaccggcggtctg
ccgcgggtggcggagctgttcgaggcacggcgcccgaaggacgcggcgatcatcgccgag
aagtcggggaccatcgcgttcggccgcgactacaagaacaagcgtcggctcacgctgacg
ccgcatgacggctcggaggcggtcgagtacctgatcccgaagggcaagcacatccacctg
caggacggcgacgtggtcgagctcggcgattacatcgtcgacggcaacccggcgccgcac
gacatcctggcgatcaagggcgtggaggaactcgcggcctacctcgtcaacgagatccag
gaggtctaccggctgcagggcgtgtcgatcaacgacaagcacatcgaggtgatcgtccgt
cagatgctgcagaaggtcgaggtgaccgacggcggcgactcggacatcctctcgggcgac
cagatcgatcgcacggagctgaccgactacaacgagaagctgctcgccgagggcaagaag
ccgatccagggcgtcccggtcctgctcggcatcaccaaggcgtcgctgcagacgaagtcg
ttcatctcggcggcctcgttccaggagaccacccgcgtcctcaccgaggcggcggtcaac
ggaaaggtcgacacgctggaaggcctgaaggagaacgtcatcgtcggctcgctcatcccg
gccggcacgggctcgatggtggcggacatccgctccatcgcccgccgccgcgacgcgatg
atcctgcagcagaagcaggccgagagcggcgcgatgccggtcgaggagcttccgccggcc
gctgccgagtaa
DBGET
integrated database retrieval system
