Methylobacterium radiotolerans: Mrad2831_4404
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Entry
Mrad2831_4404 CDS
T00674
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mrd
Methylobacterium radiotolerans
Pathway
mrd00330
Arginine and proline metabolism
mrd00480
Glutathione metabolism
mrd01100
Metabolic pathways
mrd01110
Biosynthesis of secondary metabolites
mrd04148
Efferocytosis
Module
mrd_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Mrad2831_4404
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Mrad2831_4404
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Mrad2831_4404
Enzymes [BR:
mrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Mrad2831_4404
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Chitin_bind_4
Motif
Other DBs
NCBI-ProteinID:
ACB26370
UniProt:
B1M475
LinkDB
All DBs
Position
complement(4669211..4671556)
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCAPAFDPDDLEGARVNQIVAAVEQRGFEVVRARRVEDAAIAVQTDAAVG
CLVVDWGKRGLDGKAAALIDMMRRRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYAETLKTPFFGALVDYAEKGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKIVL
SSLVAEDDLVLFDRNNHKAAHHGALFLGGGIPIFLETDRNAYGLIGPIFHEALDEGRIRE
KIRRNPLVTDPEAWRRERPFRVAVIEQCTYDGTIYDAQEILEKIGHLCDYILFDEAWAGF
MKFHPLYARRFAMGLTGLDETSPGIVATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPLFASLDVGAQMMKGRSGMILWDDTIRLGIEWRKKVRAIRREF
EENERDPARRWFFDPFVPDVTVNADGAEVPWESVPTDELAATPRHWELKPGARWHGFSHV
APGYAITDPNKLTVLTPGFDRHTGAYAQHGVPAPIVAQYLRENRIVAEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVALEEAMPEFVNRRPNRYRGVRLRDLCGEFHAFHR
EAGTSALQRRQFAPEHLPEMVMPPKKAAQLLTRNTVDYVPIAEAEGRIATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEASANLFPGFEAEIQGVYREVDPDGRIRFHTYVAREG
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaccgccgcttcacggtcctgatgtgcgccccggccttcgacccggacgat
ctcgagggcgcgcgcgtcaaccagatcgtcgcggccgtggagcagcgcggcttcgaggtg
gtgcgcgcccggcgcgtcgaggacgcggccatcgcggtccagaccgacgcggcggtcggc
tgcctcgtggtcgactggggcaagcgcggcctcgacggcaaggcggccgccctcatcgac
atgatgcgccggcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctcctcgacttcatcgacggctacatcttcctcgccgaggag
acgccggaattcatcgcccgcggcctcgtcagccgggtcacgcagtacgccgagaccctc
aagacgccgttcttcggcgcgctcgtcgactacgccgagaagggcaaccagctctggacc
tgcccggggcacaacggcggcatcttctacaaccggtcccccatcggccggatcttcgtg
gagcacctgggcgaggcgatcttccgcgacgacctcgacaactcggtcctcgacctcggc
gacctgctgacccacgagggcccggcgctgaaggcccagaaggaggccgccaagatcttc
ggggcggagaagacctacttcgtcctcaacggcacctcggcgtccaacaagatcgtcctg
tcctccctggtggcggaggacgacctcgtcctgttcgaccgcaacaaccacaaggcggcc
caccacggcgccctgttcctgggcggcggcatcccgatcttcctggaaacggatcggaac
gcgtacggcctgatcgggccgatcttccacgaagctctcgacgaaggccggatccgggag
aagatccgccggaacccgctggtgaccgatccggaggcgtggcgccgggagcggccgttc
cgcgtcgcggtgatcgagcagtgcacctacgacggcacgatctacgacgcccaggagatc
ctggagaagatcggccacctctgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctacgcaaggcgcttcgccatggggctgacgggcctcgacgag
acctcgcccggcatcgtcgccacgcagtcgacccacaagcagctcgcgagcttcagccag
gcctcgcagatccacacccgcgacggccatatccgcggccagacccggcgggtcgagcac
aagcggctcaacgagagcttcctcgtccacgcctcgacctcgcccttctacccgctcttc
gcctccctcgacgtcggcgcccagatgatgaaggggcgctccggcatgatcctgtgggac
gacacgatccgcctcgggatcgagtggcgcaagaaggtccgggcgatccggcgggaattc
gaggagaacgagcgcgatcccgcccggcgctggttcttcgacccgttcgtgccggacgtg
acggtgaacgccgacggcgccgaggtgccgtgggagagcgtgccgaccgacgagctcgcc
gcgacgccgcgccactgggagctgaagccgggcgcgcgctggcacggcttcagccacgtg
gcgccgggctacgccattaccgacccgaacaagctcaccgtgctgacccccggcttcgac
cggcacacgggggcctacgcccagcacggcgtgccggcgccgatcgtggcgcaatacctg
cgtgagaaccggatcgtcgccgagaagaacgacctgaactcgctgctcttcctgctgacc
ccgggggtcgaatcctccaaggccggcacgctgatctcgggcctcgtcgccttcaagcgg
ctccacgacgacaacgtcgcgctggaggaggccatgccggaattcgtcaaccgccggccg
aaccgctaccgcggcgtgcgcctgcgcgacctctgcggcgagttccacgccttccaccgg
gaggccggcacctccgcgctgcagcggcgccaattcgcccccgagcacctgcccgagatg
gtgatgccgcccaagaaggccgcccagctgctgacccgcaacacggtcgactacgtgccg
atcgccgaggccgaggggcggatcgccaccacgctgatgctggtctacccgccgggcatc
ggcacggttctgccgggcgagcgcctggacgaaagggccaagcccatgctcgactatttc
aagatgttcgaggcctccgccaacctgttcccgggcttcgaggccgagatccagggcgtc
taccgcgaggtcgacccggacgggcggatccgcttccacacctacgtggcgcgggagggg
gtctga
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