Methylobacterium radiotolerans: Mrad2831_5125
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Entry
Mrad2831_5125 CDS
T00674
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mrd
Methylobacterium radiotolerans
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrd03016
]
Mrad2831_5125
Enzymes [BR:
mrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mrad2831_5125
Transfer RNA biogenesis [BR:
mrd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mrad2831_5125
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACB27082
UniProt:
B1LV76
LinkDB
All DBs
Position
5446939..5447562
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AA seq
207 aa
AA seq
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MPSPTVRLHRGDLPASYDAGRAVAIDTETLGLNPHRDRLCVVQLSTGDGTADVVQIPQAG
PEPVVLKRVLADPGILKIFHFARFDVAVLYRALGVMPSPVYCTKIASKLARTYTDRHGLK
DVVRELVGVDLSKQQQSSDWGAETLSQAQLDYAASDVLHLHAARERLDAMLAREGRTDLA
AACFGFLPTRARLDLDGWPETDIFAHT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcccgaccgtccgtcttcaccgcggcgacctgcccgccagctacgacgcgggc
cgggcggtggccatcgacaccgagacgctcgggctcaacccgcatcgggaccgcctctgc
gtggtgcagctctccaccggcgacggcaccgccgacgtggtccagatcccgcaagccggg
ccggagccggtcgtgctcaaacgggtcctggccgatcccggcatcctgaagatcttccac
ttcgcgcggttcgacgtggcggtcctgtacagggccctcggcgtgatgccgagcccggtc
tactgcaccaagatcgcctcgaagctcgcgcgcacctacacggaccgccacgggctgaag
gacgtggtccgcgagctggtcggcgtcgacctgtcgaagcagcagcaatcctcggactgg
ggcgccgagaccctgtcgcaggcccagctcgactacgcggcctcggatgtcctccacctc
cacgcggcccgggagcggctcgacgccatgctggcccgggaaggccgcaccgatctcgcg
gccgcctgtttcggcttcctgccgacgcgggcgcgcctcgacctcgacggctggcccgag
actgacatcttcgcgcacacctga
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