Methylobacterium radiotolerans: Mrad2831_5373
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Entry
Mrad2831_5373 CDS
T00674
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mrd
Methylobacterium radiotolerans
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrd01002
]
Mrad2831_5373
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrd01011
]
Mrad2831_5373
Peptidases and inhibitors [BR:
mrd01002
]
Cysteine peptidases
Family C82
Mrad2831_5373
Peptidoglycan biosynthesis and degradation proteins [BR:
mrd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Mrad2831_5373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACB27320
UniProt:
B1LYD6
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All DBs
Position
5683492..5684790
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AA seq
432 aa
AA seq
DB search
MRKKAQNRFTTILSVAALGALGMGAAEARDQGNYAQAEWAQDYASPAGMQVQRETVPILS
PQTVASTEQMVERYKDIVARGGWRQVSGADHLRIGSRGPAVAAIRQRLIVTGDLDPAAGS
SGVYDSYVAAGVKRFQARHGLSQTGAMTMATQQAMNVPADVRLRQLEINVVRLRSYSGDL
GRRFVITNIPAALVETVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPTWTVPASIV
KKDLIPKMQKDPNYLTDNKIRILSNGSEVSPKSVNWFSDEGTRYTYRQDSGADFNSMGIV
RINIPNPYGVFMHDTNTKGVFGDDFRFISSGCVRVQNVREYITWLLKDTPGWDRQKVEEA
IESGKRIDANIAQPVPVYWTYITAWSTPDGIVQFRDDIYKRDGVNVPSTIGAPTPVASAE
PMPQTFEPGDEE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaaggcacaaaaccggttcaccacgatcctgagcgtcgccgccctcggcgcg
ctcggcatgggcgccgccgaagcccgcgaccagggcaactacgcccaggccgaatgggcg
caggactacgcctcgcccgccggcatgcaggtgcagcgcgagacggtgccgatcctctcg
ccccagaccgtggcatccaccgagcagatggtggagcgctacaaggatatcgtcgcccgc
ggcggctggcggcaggtctccggcgccgaccacctgcggatcggctcgcgcggcccggcc
gtggcggccatccgccagcgcctgatcgtcaccggcgacctcgacccggccgccggcagc
tcgggcgtctacgattcctacgtcgccgcgggcgtgaagcggttccaggcccggcacggc
ctcagccagaccggcgccatgacgatggccacccagcaggccatgaacgtgccggccgat
gtccgcctgcgccagctcgagatcaacgtcgtgcgcctgcgctcctactcgggcgatctc
ggccggcgcttcgtgatcaccaacatcccggccgcgctcgtcgagacggtcgagaacggt
caggtcgtcacgctccacgccgccggcgtgggcaagatcgaccgccagtcgccgatcatg
aacaccaaggcgacgcagatcaatttcaacccgacctggacggtcccggcttccatcgtg
aagaaggacctgatcccgaagatgcagaaggatccgaactacctcacggacaacaagatc
cggatcctgtcgaacggctccgaggtttcgccgaagtcggtgaactggttctcggacgag
ggcacccgctacacctaccggcaggattcgggcgccgacttcaactcgatgggcatcgtc
cgcatcaacatcccgaacccttacggcgtgttcatgcacgacacgaacaccaagggcgtg
ttcggcgacgatttccgcttcatctcctcgggctgcgtgcgcgtgcagaacgtgcgcgag
tacatcacgtggctgctgaaggacacgcccggctgggaccgccagaaggtcgaggaggcg
atcgagagcggcaagcgcatcgacgccaacatcgcccagcccgtgccggtctactggacc
tacatcaccgcctggtcgaccccggacggcatcgtccagttccgcgacgacatctacaag
cgcgacggcgtgaacgtgccctcgaccatcggcgcgccgaccccggtcgccagcgccgag
ccgatgccgcagaccttcgagcccggcgacgaggagtag
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