Meiothermus ruber DSM 1279: K649_02600
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Entry
K649_02600 CDS
T02636
Name
(GenBank) RecQ familyATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mre
Meiothermus ruber DSM 1279
Pathway
mre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K649_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mre03019
]
K649_02600
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_02600
Enzymes [BR:
mre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K649_02600
Messenger RNA biogenesis [BR:
mre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K649_02600
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K649_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AGK03822
UniProt:
M9X3B7
LinkDB
All DBs
Position
complement(496317..499862)
Genome browser
AA seq
1181 aa
AA seq
DB search
MRIDRLAYLVGWDPKGWPHHNPLQGVPYFLQQALLVLAEAEGLQLDWVEGDLRTAQLPEY
ADALELWPAEAYSRFSLLDPMAPERQGAFGRLLLPFFERAMPDSAALDAPKPGPEHWRLG
GAPVTVDALEALQASSRWTLVQAKRQGIAVRSGDPAWGRWLVLGPAALRLWSAAWLARLG
TGESGELRVRIRGDQPLPVLALLDSLELLEVVRRLYGLKQRLPRVRLEADGLGEASQRAL
RAYLGDPEGQLRRLLLAEVEFGSVSEVDVLIDDPQDPLLLADWQPDEVLEAARGLIQDPA
GIDPGYHIVDPAPEVLDHLFSRFFRHHRLRPEQAEAVRRVLAGESLLVLLPTGYGKSAIY
QLAALIQPGTALVVSPLVSLILDQVDHLYRDGITGVGFMSGRKHAAGTAEATLEHLRNGR
YRLFYIAPERLDLANFRRELGELIRGHRFSLIAVDEAHCVSEWGHDFRTSYLHLKGLRQY
IEQQGVTERVPMLALTATASPVVRADILRLLGISPDSVVQSRSSDRPELSYSVHVVDGRQ
GFAGRLQALDEVLTRVAPTVLGAGSEGLLERDSRGRHRHGAVVFAPFANAHSRAFFASNA
AAVAEHLRRNRVLPEGAVGIHSNSAPGHCPRCGSTRYYSDYGRYRCAEADCGFVGKRDDF
TSPSDWDEHLLEVQAQFLDNRLPVLVSTKGFGMGIDKPNIRLVVHYVMSGSLEGYYQEAG
RAGRDRAHAHVALVTVPPDPTCAEQHLGDRAIFGLGADDPLPLPCLERDRRGFPTLRCPF
GLKELCDVGQQAYFINQNFPGARDELTQLTEAYNRALTGRLLVESAGAGDSKPVEKALSR
LRVLEVLHTYTRQRSHAYRATLNQDWTWARGVAALADYVRGYGEATGTPDAVLIEVEELA
RSEGNQAEFVQRAGKILIEALYTTIRAMRLAGLRNLYHYAALPAGSCRRVYLRRAFELRL
PQDYSCGFCDTCVPDMKFGRERALVPEEAARERILAEGLENVLTGYNLTALRTYAREVVE
AGFVGAVRGRAEYLLEQRPNDLAVLFLAALCAGLEGERATAKVLTERALDVMLRARMGLT
NQLAFVLALGEWVPSLADDLAGDPQGVLGRNHPRLTLLETLRQLDPARAAHVERAWALEG
LVKVAERLSKLLPAEVLKAFTTAVEHVTPPHRDRGIGGMNG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgaggattgaccgccttgcctatctggtcggctgggatcccaagggttggccccaccac
aacccgttgcaaggagtaccttacttcttgcagcaagccctgctcgtacttgccgaagca
gaggggctgcagttggattgggttgagggtgatctgcgcaccgcccaattaccggagtac
gcggacgcgttggaactgtggcctgccgaagcctacagccgcttctctcttcttgaccca
atggctccagagcgccagggtgctttcggcaggcttttgctcccctttttcgagcgagcg
atgcccgattccgcggcgctagatgcaccaaagcccggcccagagcactggcgcctgggc
ggcgcgccggttaccgtcgatgctctagaggccctacaagcctcatcgcgctggaccctg
gttcaggcaaaacggcaagggatagccgtgcggagcggtgatccggcctggggacgctgg
ctggtgctgggaccggcagcgctgcggctgtggtcggctgcctggctggcccggctgggc
acaggggaatcgggcgagttgcgggtgcggattcgcggcgaccagcctctaccggtgctc
gcactcctggacagcctggaattgctggaagtggtgcggcggctttacggccttaagcag
cgattgccgcgagtccggctggaggccgatgggctgggagaagcgtcgcagcgggcactc
cgggcctacctgggcgaccccgagggccagcttagacgcttgctgctggcggaggtggag
ttcggatccgtgagtgaggtggacgtgctcatcgacgacccccaagacccactcttgctg
gcggattggcagccggacgaggttctggaggccgctcgggggttaattcaggatccggcg
ggcattgacccgggctaccacatcgtcgatccggcgccggaggtgctcgaccacctgttc
agccggtttttccgccaccaccgcctgagaccggagcaggccgaggccgtgcggcgggtg
ctcgctggcgagagtctgctggtgctgctgccaacgggctacggcaaatcagcaatttat
cagctagctgccctgatccagccgggcaccgccctggtggtctccccgctggtctcactc
attctcgaccaggtcgaccacctctaccgcgacgggatcaccggggtgggcttcatgagt
ggacgcaagcacgctgccgggaccgcagaggccacgttggagcaccttcgcaatggccgc
taccgtcttttctacatcgctcctgagcgcctcgacctggccaacttccggcgggagctg
ggggagctcatccggggccaccgcttctctctaatagccgttgacgaggcccactgtgtg
tcagagtgggggcacgatttccgcacctcttacctccatctcaagggtctacgtcagtac
atagagcagcaaggagtgaccgagcgtgtaccgatgctggccctcaccgccactgcctca
ccggtggtgcgtgcagatatcctgcgtctgctgggcatcagtccagacagtgtggtgcag
agccgcagtagcgaccggcccgagcttagctacagcgtccacgtcgtcgatggccgccag
ggcttcgctggacgactgcaagcactggacgaggtgctgacccgggtcgcgcctaccgtg
ttgggggcagggagcgaggggttgctcgagcgcgactcccgcggccgccaccgccacggc
gcagtggttttcgccccctttgccaacgctcacagccgtgcctttttcgccagcaacgca
gcggcggtggcagagcacctccggcgcaacagggtgctgccagagggagcggtaggcatc
cactccaactctgccccgggccactgcccgcgctgtggctctacccgttactacagcgac
tacggccgttatcgctgcgctgaggcggactgcgggttcgttgggaaaagggacgacttc
accagccccagcgattgggacgagcatctgctagaggttcaggcccaattcctcgacaac
cgcctgccggtgctggtctcgaccaaaggcttcgggatgggtatcgacaagccgaacata
cgcctggtggtgcactacgtgatgtcaggcagcctggagggctactaccaggaggctggc
cgggctggacgtgaccgcgcgcacgcccacgttgcgctggtcacagttcctccggatccc
acctgcgccgagcagcacctgggcgaccgggctatcttcggactgggagcggacgacccc
ctaccgctcccctgtctggaacgcgacaggcggggtttcccaacgttacggtgtcccttc
ggcttgaaggagctttgcgacgtgggccagcaggcttatttcatcaaccagaatttcccc
ggtgcccgggatgaactaacccaacttaccgaggcctacaacagggcgctgaccgggagg
ctgctggtggagtcggccggggctggtgacagcaaaccggtggagaaggccctctcccgc
ctgcgagtgttggaggtgcttcacacctatacccgccagaggagccacgcctaccgagcg
acgctcaatcaggactggacctgggctcgcggcgtcgccgctctggctgactacgtgcgc
ggctacggcgaagccacgggcaccccggacgcggtgctgatcgaagtcgaagaactggcc
cgctccgagggaaaccaggccgagttcgtgcagcgagccgggaagatcctcatcgaggcg
ctctataccacgatccgggccatgcggctagcagggctgcgcaacctctaccactatgca
gccctgccggcgggcagttgtcggcgcgtatatcttcggcgggccttcgagctacgcctg
ccacaggactatagctgcggtttctgtgacacctgcgtaccggacatgaaattcgggcgt
gagcgagctctggttcccgaggaggcagcgcgcgagcggatcctggccgagggtcttgag
aacgtgcttacaggctacaacctcacggcgctgaggacatacgcccgcgaagtggtcgag
gcgggattcgtgggcgctgtgcgcggccgggcggagtatctgctcgagcaacgacccaac
gacctggcggtgctgtttctggctgccctgtgcgcgggcctcgagggcgagagggccacc
gccaaggtgctgaccgagcgtgctctggacgtgatgctgcgcgcacggatgggcttgacg
aaccagctggccttcgtgctagccctgggagagtgggtgccgagcctcgctgacgaccta
gcaggggatccccagggggttctgggacgcaaccacccccgcctcaccctgcttgagacc
ctccggcagcttgaccctgctcgtgcagcgcacgttgaacgtgcctgggcgcttgaggga
ctggtgaaggttgccgagcgcctgagcaagttgctgcctgcagaagtgcttaaggctttc
accactgctgttgagcacgtcacgcccccacatagagatagaggtataggaggaatgaat
ggctga
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