Meiothermus ruber DSM 1279: K649_05745
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Entry
K649_05745 CDS
T02636
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mre
Meiothermus ruber DSM 1279
Pathway
mre03420
Nucleotide excision repair
mre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K649_05745
03430 Mismatch repair
K649_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_05745
Enzymes [BR:
mre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K649_05745
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K649_05745
MMR (mismatch excision repair)
Other MMR factors
K649_05745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_11
DUF3553
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGK04451
UniProt:
D3PR99
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All DBs
Position
1161839..1163959
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AA seq
706 aa
AA seq
DB search
MSDLLSSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTF
TNKAAGEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTL
LKEVLKELELEAKPGPFRAMIDRIKNRGAGLAEYMREAPDFIGGVPKDAAAEVYRKYQSG
LRMQGALDFNDLLLLTIELFEQHPEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLAGER
PNLMVVGDPDQSIYGFRSADINNILDFTKDYPGARVIRLEENYRSSSSILRVANAVIEKN
ALRLEKVLRPTRPGGEPVRLYRAPNAREEAAFVAREIVKLGNFQQIAVLYRTNAQSRLLE
EHLRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPPRGIGATTVS
RLVEHAQKTGTTVFEAFRVAEQVISRPQQVQAFVRLLDELIEAAFESGPTAFFQRVLEQT
GFREALKQEPDGEDRLQNVEELLRAAQDWEEEEGGSLSDFLDSVALTAKAEEPQGDAPAE
AVTLMTLHNAKGLEFPTVFLVGLEENLLPHRNSLHRLEDLEEERRLFYVGITRAQERLYL
SYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVLPQARPEPKPRTQLAEFK
GGEKVRHPKFGSGTVVAAMGGEVTVMFPGVGLKRLAVKFAGLERLE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctcctttcctccctcaacccctcccaacaggaggccgttttgcactttgaa
ggcccggccctggtggtggcgggggccggttctggcaagacccgcacggtggtacaccgc
atcgcctacctgttgcgtgagcgccgcgtatacccggctgagatattggccgtaaccttc
actaacaaagcagctggcgagatgaaggagcggctggagaagatggtggggcgccccgcc
cgggatctctgggtctccacctttcacgcggcagcggtgcgaattttgcgcacctacggt
gagtacgtggggcttaggccgggctttgtgatttacgatgaagacgatcaaaacaccctg
ttgaaggaggttttgaaagagctcgagctcgaggccaagccaggccccttccgggctatg
atcgaccgcatcaagaaccggggggccggcctggcggagtatatgcgcgaggcccccgac
tttatcggcggcgtgcccaaggatgcggccgccgaggtttaccgcaagtaccagagtggg
ctgcgaatgcaaggagccctggacttcaacgacctgctgctgctaaccatcgagctgttt
gaacagcaccccgaggttttgcacaaggtgcagcagcgggcccgttttattcatgtggat
gagtaccaggacaccaatccggtgcagtacaaactcacccgcctgctggctggtgaacga
cccaacctgatggtggtaggcgaccccgaccagagcatttatggtttccgaagcgccgat
atcaacaacatcctcgacttcaccaaagactatccaggagccagggtgattcgcctggag
gaaaactaccgctcgagcagcagtattctccgggtggccaacgcggtcatcgagaaaaac
gccctgcgcctggaaaaagtgctgcgcccgaccaggccggggggtgagccggtgcgcctg
taccgcgcccccaacgcccgcgaagaggccgcttttgtggcccgggaaattgtgaagctg
gggaattttcagcaaattgcggtgctttaccgaaccaatgcccagtcccgcctgctggaa
gagcacctgcggcgggccaacgttccggtgcggctggtgggggcggtggggttttttgag
cggcgggagatcaaagacctgctggcctacgggcgcgtggcggtgaacccggccgactcg
atcaacctgcgccgcatcgtcaatacgccaccccgcggcattggggcgaccacggtatcc
aggctggttgaacacgcccagaagaccggcaccacggtttttgaggcttttcgtgtggcc
gagcaggtgattagccgtccccagcaggtacaggcctttgtgcgcctgctggacgaactg
atagaggctgcttttgagtctggccctacggcttttttccagcgggtgctggaacagacg
ggctttcgcgaggccctgaagcaggagccggacggtgaagaccgcctgcaaaacgtggaa
gagcttttacgggccgcgcaagactgggaagaagaggagggtggtagtctttcggacttc
ctcgactcggtggcccttaccgccaaggccgaggagccccagggcgatgccccggcagaa
gccgttaccctcatgaccttgcacaacgccaagggcctcgagtttcccacggtatttttg
gtgggcctggaagaaaacctgctgccccaccgcaacagcctgcatcggctggaagacctg
gaggaagaaaggcgcctgttttacgtgggtatcacccgggcccaggaacggctttacctg
tcttatgccgaagaacgggagacctacggcaagcgcgagtatacccgcccaagccgcttt
ctggaggatatcccccaagacctgctcaaggaggtgggggcctttggcgatagcgaggtg
cgggtgctcccacaggcccgccccgaacccaagcccagaacccagctagccgagtttaag
ggtggagaaaaagtcagacaccccaagtttggcagcgggacggtggtggccgcaatgggt
ggagaggttacggtgatgtttcctggggtgggtttgaagcggctggcggtcaagtttgcc
ggcctcgagcggctcgagtga
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