Meiothermus ruber DSM 1279: K649_07885
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Entry
K649_07885 CDS
T02636
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mre
Meiothermus ruber DSM 1279
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mre03032
]
K649_07885 (gyrB)
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_07885 (gyrB)
Enzymes [BR:
mre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K649_07885 (gyrB)
DNA replication proteins [BR:
mre03032
]
Prokaryotic type
DNA Topoisomerases
K649_07885 (gyrB)
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K649_07885 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGK04872
UniProt:
D3PPQ9
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All DBs
Position
1588868..1590799
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AA seq
643 aa
AA seq
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MSTDLTTSYDASAIKVLKGLEGVRHRPAMYIGGTQADGYHHLFKEILDNAVDEALAGFAT
EIVTTLHPDGSITVEDNGRGIPVDIMPEEQKPAVEVIYTVLHAGGKFEEGAYKVSGGLHG
VGASVVNALSEFTRVEVFRDGKHHLIEFSRGEVTRPLQVVGEAPKGKRGTRVTFLPDPQI
FGSEQKFEASRLRVRLREVSFLVAGLKLVFKDEIHQKEEVFFDKGGVASFAKFRADGEEL
LYDKPVLLQGQVEAVGVEVGLVHTKGYSADLVSFANMIPTVDGGTHVSGFKTAYTRAINT
YAKKAGLVKDLEPTGDDLLEGLSCVISVKIPQPQFEGQTKGKLLNPEAGTAVSRVVYEKF
SEYLEENPRIAKMIYEKAQRAAQAREAARKARELVRRANPLESDDLPGKLADCQSEDPAE
AELFIVEGDSAGGSAKSGRDRRFQAILPLRGKILNVEKAGLNKALKNAEVRAMVAAIGAG
IGGKDNEEAHFNIEDLRYHKIIIMTDADVDGSHIRTLLLTFFYRYMRPIIERGYLYVAQP
PLYGLRVGKSKQMEYIFDDEALKKALANIGDKPYEIQRFKGLGEMNAEQLWETTMDPARR
VLKKVDMKDASYAAQIFDDLMGSDVQPRREFIEENARFARIEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactgaccttaccaccagctacgatgcatccgcaattaaggttttgaaaggcctg
gaaggggttcgccaccgtccggccatgtacattggcggtactcaggccgatggctaccat
cacctgttcaaagaaattctcgataacgcggtggacgaggccctggctggttttgctacc
gagattgttaccaccctgcaccccgatggctccatcaccgtggaagataacgggcgtgga
attccggtggatatcatgcctgaagagcaaaagcccgcggtggaggtgatctacaccgtg
ctgcacgcggggggtaagttcgaagaaggggcctataaagtctcgggcggcctgcacggg
gtgggggccagcgtggtgaacgccctgtctgaatttacccgcgtggaggtcttccgcgat
ggcaagcaccacctgatcgagttcagccgaggggaggtgaccaggcccctacaggtggtg
ggggaggcccccaaaggcaagcgcggcacccgcgtgaccttcctgcccgacccccagatt
ttcggcagcgagcaaaagtttgaggccagccgcctgcgggtgcgcctgcgcgaggtctcc
ttcctggtggcgggtctcaagctggtctttaaggacgagattcatcaaaaagaagaggtt
ttcttcgataaaggcggggtggcctccttcgccaaattccgcgccgacggcgaggagctg
ctctacgataaaccggtgctcttgcagggccaggtggaggcggtgggggtggaggtgggc
ctggtgcacaccaagggctacagcgccgacctggtgagctttgccaacatgattccaacc
gtggatgggggcacccatgtctcaggcttcaagaccgcctacacccgcgccatcaacacc
tacgccaagaaagccggcctggtcaaagacctggagcccaccggcgacgacctgctggag
ggcctgtcctgcgtgatctcggtcaagatcccccagccccaatttgagggccagaccaag
ggcaagcttctgaaccccgaggccggtaccgctgtaagcagggtggtgtacgagaagttt
tccgagtacctcgaggaaaacccccgcattgccaagatgatctacgaaaaggcccagcgg
gcggcccaggcccgtgaggcggcccgcaaggcccgcgagctggtgcgccgggccaacccc
ctcgagtccgacgacctgcccggcaagctggccgactgccagtcggaagaccccgccgag
gccgaactcttcatcgtggaaggggatagcgcgggcggcagcgccaagagcggacgcgac
cgccgcttccaggccatcctgcctttgcgcggcaaaattctcaacgtcgagaaggccggc
ctgaacaaagccctcaagaacgccgaggtgcgggccatggtggcggccatcggggcgggc
attggcggcaaggacaacgaagaggcccacttcaacatcgaagacctgcgctaccacaag
atcatcatcatgaccgacgccgacgtggacggctcgcacatccgcaccctgctgctcacc
ttcttctaccgctacatgcgccccatcatcgagcggggctacctgtacgtggcccagccc
cccctgtacggcttgcgggtgggcaagagcaagcagatggagtacattttcgacgacgaa
gccctcaagaaagccctggccaacatcggcgacaagccctacgagatccagcgcttcaag
ggcctgggcgagatgaacgccgagcagctctgggagaccaccatggaccccgcaaggcgg
gttttgaaaaaggtggatatgaaagacgcctcttacgccgcccagattttcgacgacctg
atgggctccgacgtgcagccccgccgggagttcatcgaggagaacgcccgcttcgcgcgg
attgaagtttag
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