Meiothermus ruber DSM 1279: K649_11905
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Entry
K649_11905 CDS
T02636
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mre
Meiothermus ruber DSM 1279
Pathway
mre03030
DNA replication
mre03430
Mismatch repair
mre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K649_11905
03430 Mismatch repair
K649_11905
03440 Homologous recombination
K649_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mre03032
]
K649_11905
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_11905
Enzymes [BR:
mre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K649_11905
DNA replication proteins [BR:
mre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K649_11905
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K649_11905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AGK05671
UniProt:
D3PTU7
LinkDB
All DBs
Position
2376404..2380177
Genome browser
AA seq
1257 aa
AA seq
DB search
MATELNSSGQSHDPNACPTCKFAHLHQHTQFSLLDGAARLKDLLKWVKQVSPEEPMLAMT
DHGNMFGAVQFYKYATELGVKPIIGYEAYVAAESRFDRKQGKGLDGGYFHLTLLAQNMEG
YQNLSRLASRAYLEGFYGKPRIDREILREHNAGIIALSGCLGAEIPQFILQERFEDAEKR
LQEYLAIFGPERYFIEIQNHGLAEQHKVNRVLKEFADKYGLGLVATNDGHYVKKDDAEAH
AVLLAVQSKATWDDPNRWKFPCDEFYVKSPQEMRQTFEDERNLWGSRMDELFDNSVNIGR
MCEVELVPKKVQYRIPKYPLPEGRTEVVYFRELTFNGLLKRYPDRVTPELYREFLRKLGR
PVPHGDGEVLALELARIEDLEATRAHLPELREGIQWDGWAILSRAIYELTVVERMGFPGY
LLIVSDFINWAKNNGISVGPGRGSAAGSLVTYATRITNIDPLEYNLLFERFLNPARVSMP
DIDTDFSDVRRGEVIEYVRQRYGDEMVAQIGTFGTLASKAAIKDAARVFGLPVKKADELA
KLIPVTFGKPMPLDKAIETIPDLRAEMEKDPLVKRVLEVAQKLEGLSRQSSVHAAGVVIS
DVPLRDYIPLMRAGDTGAKVTQYDMGSVEALGFLKMDFLGLRTLSFLDECKRIIKESKGV
ELDYDNLPIDDAKTFELLGRGETKGVFQLDSAGMTSAVRGLKPRRIQDIIALGALYRPGP
MENIPTYIRRHHGREEVSYPQFPNAEKFIRPILEETYGIPVYQEQIMQIATAVAGYSLGE
ADLLRRAMGKKKMEEMVKQRAQFKEGAAKNGIPAEEADRLFDLLEAFANYGFNKSHAAAY
AILTYQTAYVKAHFPVEFFAAVLTVERHDSDKVAEYIRAARTAGVEVLPPDINQSGFSFR
ALEKSVLFGLSAVKNVGETPTELILRERERGGPYKSLPDFLRRLDGTVANKRVVESLIKA
GAFDAFGPRGPMLAALDDLLKWAQAEREQAQSGMMGLFGESLEPVIPAVPQLDAITQLRM
EKEALGIYVTGHPLSRYQGLREAASCTIEELPQAFAELKGNRNRARLLLAGMVEGIVRKP
TKSGGMLVRFTLADETGAVEVVAFGRAYDKISPRIAEDAAVLVAVEVEPDGEGETLRVVA
QEVFPYHELEGLPKVLELELDMALLDEEKLLDLRSRLDEVAGPLPVQLKVRGPGGWALVE
AREVRAAEEALPVLKDLDWLEARLIPDREMLLGYGKPTEGNGFRNQKGPDQGPVVPF
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgagcttaattcatccgggcaatcgcacgatcccaacgcctgtccaacctgt
aaattcgcccacctgcaccagcacacccagttcagcctgctggatggggcggcccggctc
aaagacctactgaaatgggtcaagcaggtctcgcccgaggagcccatgctggccatgacc
gaccacggcaacatgtttggggcggtgcagttttacaaatacgccaccgagctgggggtc
aagccgatcatcggctacgaggcctatgtggcggcggagtcgcgcttcgaccgcaagcag
ggcaaggggctggatgggggttactttcacctcacgctgctggcgcagaacatggagggc
taccagaacctctcccgcctggccagccgggcctacctcgagggcttctacggcaaaccc
cgcatcgaccgcgagattctgcgcgaacacaacgccggcatcatcgcgctttcgggctgc
ctgggggccgagattccccagttcatcctgcaggagcgcttcgaagacgccgaaaaacgc
ctgcaggagtacctcgcgattttcggcccggaacgctactttatcgaaattcagaaccac
ggcctggccgagcagcacaaggtgaacagggttctgaaggagttcgccgataagtacggc
ctgggcctggtggctaccaacgacggacactacgtcaagaaagacgacgccgaggcccac
gcggtgttgctggcggtgcagtccaaggccacctgggacgaccccaaccgctggaagttt
ccctgcgacgagttctacgtcaagagcccccaggagatgcgccagaccttcgaggacgaa
agaaacctctggggcagccgcatggatgagctgttcgacaactcggtgaacatcgggcgg
atgtgcgaggtggagctggtgcccaaaaaggtgcagtaccgcatccccaagtaccctttg
cccgagggtcgcaccgaggtggtctacttccgcgaactcacctttaatggcttgctcaag
cgctaccccgaccgggtgacccccgagctctaccgggaattcctgcgcaagctaggccga
ccggttccgcatggggatggggaggtgctggccctcgagctggcccgcatcgaggacctc
gaggccacccgggcccacctgcccgagctcagggaaggcatccagtgggatggctgggcc
attctctcgcgcgccatctacgaactgaccgtggtggagcgcatgggctttccgggctac
ctgctcatcgtgagcgatttcatcaactgggccaagaacaacggcatctcggtggggccg
ggccgcggctcggcggcgggctcgctggtgacctatgccacccgcattaccaacatcgac
cccctggagtacaacctgctgttcgagcgcttcctcaacccggcccgggtctccatgccc
gacatcgacaccgacttctcggacgtgcgccggggcgaggtgatcgagtatgtgcgccag
cgctacggcgacgagatggtagcccagatcggcaccttcggcacgctggcctccaaggcg
gccatcaaggatgcggcgcgggtgtttggcctgccggtcaaaaaagccgacgagctggcc
aagctcatcccggtgaccttcggcaagccgatgccgctggacaaggcaattgaaaccatt
cccgacctgcgggccgagatggaaaaagaccccctggtgaagcgggtgctcgaggtggcc
cagaagctcgagggcctctcgcgccagagcagcgtacacgccgccggggtggtcatctcg
gacgtgcctttgcgcgactacatccccctgatgcgggccggggataccggggccaaggtc
acccagtacgacatgggctcggtggaggccctgggcttcctcaagatggactttctgggt
ctgcgcacgctctcgtttttggacgagtgcaagcgcatcatcaaggagtccaagggggtc
gagctcgactacgacaacctgcccatcgacgacgccaaaaccttcgagctgctgggccgg
ggggagaccaagggggtcttccagctcgactcggccggcatgaccagcgcggtgcggggg
ctcaagccgcgccgcatccaggacatcatcgccctgggggcgctgtaccggcccggcccc
atggagaacatccccacctacatccgccgccaccacgggcgggaggaggtgagctacccg
cagttccccaacgccgagaagttcattcggcccatcctggaggagacctacgggattccg
gtttaccaggagcagatcatgcagattgccaccgcggtggccggctacagcctgggggag
gccgacctgctgcgcagggccatgggcaaaaagaagatggaggagatggtcaagcagcgg
gcgcagtttaaggaaggggccgccaaaaacggcatccccgccgaggaagccgaccggttg
tttgatttgctcgaggccttcgccaactacggcttcaacaagagccacgccgcggcctac
gccatcctgacctaccagaccgcctatgtaaaagcccacttcccggtggagttcttcgct
gcggtgctcacggtggaacgccacgactccgacaaggtggcggagtacatccgggcagcc
cgcacggctggggtggaggtgctgccccccgatatcaaccagtcgggttttagcttccgg
gccctggaaaagagcgtgctgtttgggctttcggcggttaagaacgtgggcgagaccccc
accgagctcattttgcgggaacgcgagcggggcgggccctacaaatcgctgccggacttc
ctgcggcggctcgatggcaccgtggccaacaagcgggtggtggagtccttgatcaaggcc
ggggccttcgatgcttttgggcctcgaggccccatgctggccgccctcgacgacctgctc
aagtgggcccaggccgagcgcgaacaggcccagtcggggatgatggggctgtttggcgag
tcgctcgagccggtgatcccggccgtgccccagttggacgccatcacccagcttcgcatg
gagaaagaggccctgggtatttacgtgaccgggcaccccctctcgcgctaccagggcctg
cgcgaggccgcgagctgcacgatagaggagctgccccaggcctttgccgaactcaaggga
aaccgcaaccgtgcgcggctgctgctggccggtatggtggagggcattgtgcgcaagccg
accaagtcgggggggatgctggtgcgctttaccctggccgacgagaccggcgcggtggag
gtggtggcctttggccgggcctacgacaaaatatccccgcgcatcgccgaggatgccgcg
gtgctggtggcggtggaggtggagcccgatggcgagggtgagaccctgcgggtggtggcc
caggaggtgtttccctaccacgagctcgagggcctgcccaaggtgctggagctcgagctg
gacatggccctgctcgacgaggaaaaactcctggacttgcgcagccggctcgacgaggtg
gccgggccgttgccggtgcagctcaaggtgcgggggccgggcggctgggcgctggtggag
gcccgggaggtgcgggccgccgaggaggccctgccggttctgaaggatctggactggctc
gaggcccgcctgatccccgaccgcgagatgctgctgggctatggcaaaccgaccgagggc
aacggctttagaaaccagaaggggcccgaccaggggccggtggtgccgttctga
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