Meiothermus ruber DSM 1279: K649_14040
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Entry
K649_14040 CDS
T02636
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mre
Meiothermus ruber DSM 1279
Pathway
mre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K649_14040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mre03021
]
K649_14040
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_14040
Enzymes [BR:
mre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K649_14040
Transcription machinery [BR:
mre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K649_14040
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K649_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Caudo_TAP
Peptidase_M23
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AGK06094
UniProt:
D3PSN2
LinkDB
All DBs
Position
2799113..2803693
Genome browser
AA seq
1526 aa
AA seq
DB search
MIKREVRKVRIGLASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPQKDYECA
CGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHVELATPVAHIWYVKDVPSKIGTLLDLS
AQELEQVLYFAKYITIDPKGAMLNGVPVQKRQLLTDDEYRELRFGRQETYTIPAGVETFV
KDGDEVKKGQELAPGVVSKMDGLVLFRFPRRIRLEYIETERASLTLPKAAWIEQETYKPG
EPLAELEDSYQIISEDAGVVDVEDIGDGALVKILDPDSGTPTATYLIPTGMHLKVGQGEL
VGNGDVLAQGKGQLRMPRGRRVAKLVADTSKKEVHLSLTLERTRVVDYPLQPHMHVLVGE
GTSVRKGDKLVGAIDPEEEVYAESDGVVHLHEPASIVVMKAKLYPFEDDVEVTNGDRVSP
GDALADGGKVTSEIYGRVEVDFIRMAVRVIESYDIDAKMGAQAIQELLKEIDLGVLEAEL
VEEMKHPSRARRAKARKRLEVVRAFRDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFAT
SDLNDLYRRLINRNNRLRKLLSQGAPEMIIRNEKRMLQEAVDALLDNGRRGTPVTNPGSD
RALRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFL
LKKMEEKGIANNVKSARKMLERSRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQ
PVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSYAQAEARIQMLSSHNILSPASGEP
VAKPARDIILGLYYITQLRREKKGQGLEFASVEEALQAYEQGRVALNARIKVAGKETSVG
CLKYVFSSVDEALLAVQSGVVDHQDVVTVRLGDKLLETSPGRMLFLRIVSEAIEDPEKAQ
ELVNLEVAQEKNSLKDLVYKSFLLLGVEKTAKLLDALKYYGFVLSTTSGITIGIDDAVIP
AEKKQYLQEADAKLAQIEQAFEMGMMTEEERFQQILQLWSQTTEKVTSAVFKNFEENYPF
NPLYVMSQSGARGNPQQIRQISGMRGLMAKPSGETYPVPVKASFREGLTVLEYFISTHGA
RKGGADTALRTADSGYLTRKLHDVAHEVIVREADCGTPDYISVPLLQFDEAFRNKRLRKK
SDIESGLYGRTLGREIEVKGRVFSEGHQLSLEDVNFIVKAAEERLIEEVPVRSPLTCRTR
YGVCQQCYGWDLSAAKLVSIGESVGVVAAESIGEPGTQLTMRTFHTGGVATGTDITQGLP
RVIELFEARRPKVKAVIAEIDGTVHIEELEDKVVIYVSSEGFSKEYKVPKDARITVKEGE
TVEAGQPLTRGAIDPHQLLEAKGPEAVERYLTDEIQRVYRAQGVKLHDKHIEVIVRQMLK
YVEITDPGDSRYLEGQVIEKWDVETTNEALMAEGKTPASWKPMLMGVTKSALSTKSWLSA
ASFQHTTHVLTEAAIAGKLDELIGLKENVILGKLIPAGTGSDFVRDTQVIDQKTLKRLEE
ARREAEQAPLTPRRPGVRPEQPVREA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacgagaagttcgtaaagtacgaatcggcctggcctcccccgagaagattcgg
agctggagctatggcgaggttgaaaaacccgagaccatcaactatcgcaccctgaagcct
gagcgcgacgggctttttgacgagcgcatcttcgggccgcaaaaagactacgagtgcgcc
tgcggcaagtacaagcgccagcgtttcgagggcaaggtgtgtgaacgctgtggggtggag
gttaccaagagcatcgtacggcgctaccgcatggggcatgtggagctggccaccccggtg
gcccacatctggtatgtcaaggacgtacccagcaagattggcaccctgctcgacctatcg
gcccaggagctggagcaggttctgtactttgccaagtacatcaccatcgaccccaagggg
gccatgctaaacggcgtgccggtgcagaagcgccagctcctcaccgatgacgagtaccgc
gagctgcgctttggtcgccaggaaacctacaccattccagccggggttgagaccttcgtc
aaagacggggacgaggtgaagaaaggccaggagttggcccccggtgtggtgagcaagatg
gacgggctggtgctcttccgcttcccccgtcgcatccgcctggagtacatcgagaccgag
cgggccagcctgaccctgcccaaggcggcctggatcgaacaggaaacctacaagccgggt
gagcccctggccgagctcgaggactcctaccagattattagcgaggatgcgggtgtggtg
gatgtggaggacatcggggatggggctttggtgaaaatcctcgatccggacagcggcacg
cccaccgcaacctatctcattcctaccggaatgcacctcaaagtgggccagggcgagctg
gttggcaacggcgatgtgctggcccagggcaaagggcagctccggatgccccgggggcgc
cgggttgcaaagctggtggccgatacctccaaaaaagaggtgcaccttagccttaccctc
gagcgcacccgggtggtggactaccccctccagccccatatgcacgtgctggttggtgag
ggcacgagcgtgcgcaagggcgataagctggtgggggccatcgatccggaggaagaggtc
tacgccgagtccgacggggtggtgcacctgcacgagccggcctccattgtggtaatgaag
gccaagctctaccccttcgaagacgatgtggaggtaaccaacggcgaccgggtctcgccc
ggcgacgccctggccgacggcggcaaggtaacctcggagatctacggccgggtggaggtg
gacttcatccgcatggcggtgcgggtgatcgagtcctacgacattgacgccaagatgggg
gcccaggccatccaggagctgctcaaggagattgacctgggcgtgctcgaggccgaactg
gtcgaggagatgaaacaccccagccgggcccggcgggccaaggcccgcaagcgcctggaa
gtggtgcgggccttccgcgactcgggcaaccgccccgagtggatgatcctcgaggccgtg
ccggtgctgccccccgacctgcgcccgatggtgcaggtagacggcgggcgttttgccacc
tccgacctcaacgatctctaccgccgcctgatcaaccgcaacaaccgcctgcgcaagctc
ctgtcgcagggggcacccgagatgatcatccgcaacgagaagcgcatgctgcaggaagcc
gtggacgccctgctggacaacggccgccggggcaccccggtgaccaaccccggctccgac
cgggccctgcgctccctcaccgacatcctctcgggcaagcagggccgcttccgccagaac
ctgctgggcaagcgcgtggactactcgggccgctcggtgatcgtggtggggccgcagctc
aaactacaccagtgcggtctgcccaagcgcatggccctggaactcttcaagccctttttg
ctcaagaaaatggaggagaagggcatcgctaacaacgtcaagagcgcccgcaagatgctc
gagcgttcgcgtgacatcaaagacgaggtctgggacgccctggaggaggtcatccacggc
aaggtggtgcttctgaaccgcgcccccaccctgcaccgcctgggtatccaggccttccag
ccggtcttggtggaggggcagagcatccagcttcacccgctggtctgcgaggccttcaac
gccgacttcgacggcgaccagatggccgtgcacgtgccgctatccagctacgcccaggcc
gaggcccgcatccagatgctctcctcgcacaacatcctctcgccggcctcgggggagccg
gtggccaagccggcccgtgatatcatcctgggtctttactacatcacccagctccgccgc
gagaagaagggccagggcctggagttcgccagcgtcgaagaagccctgcaagcctacgag
caggggcgggtggccctcaacgcccggattaaggtggctggcaaagagaccagcgtgggc
tgcctgaagtatgtcttcagcagcgtggacgaggccctgctggccgtgcagagcggggtg
gtggatcaccaggacgtggtcacggtgcgcctgggcgacaagctcctggaaacctcgccg
ggccggatgctgttcctgcggattgtgagtgaggccatcgaagaccccgaaaaggcccag
gagttggtgaacctcgaggtggcccaggagaagaactcgctcaaagacctggtctacaag
agcttcctgctgctgggggtcgagaaaaccgccaagctcctggacgccctcaagtactac
ggcttcgtgctctccaccacctcgggcattaccatcggcattgacgacgcggtgatcccg
gcggagaagaagcagtacctgcaggaggccgacgccaagctagcccagatcgagcaggct
ttcgagatgggcatgatgaccgaggaggagcgcttccagcagattctgcaactctggagc
cagaccaccgagaaggtcaccagcgcggtgttcaagaacttcgaggagaactatcccttc
aacccgctctacgtgatgagccagtcgggggcccgtgggaacccccagcagatccgccag
atctccgggatgcgcggcctgatggccaagccttcgggtgaaacctaccccgtgccggta
aaggcttccttccgcgaggggctcacggtgctggagtacttcatctccacccacggggcc
cgcaagggtggggccgacaccgcgctgcgcaccgccgactcgggctacctgacccgcaaa
ctgcacgacgtggcccacgaggtgatcgtgcgggaagccgactgcgggacgcccgactac
atctcggtgcccctcttgcagttcgacgaggccttccgcaacaagcgcctgcgcaagaag
agcgacatcgagtcggggctgtatggccgcaccctgggccgcgagatcgaggtcaagggc
cgggtcttctccgaaggacaccagctaagcctcgaggacgtcaacttcatcgtcaaggcc
gccgaagagcgcctgattgaggaagtgccggtgcgctcgcccctgacctgccgcacccgc
tacggggtctgccagcagtgctacggctgggatttgtcggcggccaagctggtctcgatt
ggcgaaagcgtgggggtggtggccgccgagtccatcggcgagcctggcacccagctcacc
atgcgtaccttccacaccggcggtgtggccaccggtaccgacatcacccagggtctgccc
cgtgtgatcgagctgttcgaggcccgtcgccccaaggtgaaggcggtaattgccgaaatt
gacggaacggtgcacatcgaggagctcgaggacaaggtggtcatctacgtctcgagcgag
ggcttctccaaggagtacaaggtgcccaaggacgcccgtattaccgtcaaggagggcgag
acggtggaggccggccagcccctgacccgcggggccattgacccccaccagcttctggag
gccaagggccccgaggcggtggagcgttacctgaccgacgaaatccagcgggtctaccgc
gcccagggcgtgaagctgcacgacaagcacatcgaggtcatcgtgcggcagatgctcaag
tacgtcgaaattaccgacccgggcgatagccgttacctggagggccaggtcatcgagaag
tgggatgtggagacgaccaacgaggccctgatggccgagggcaagaccccggccagttgg
aagcccatgctgatgggggtgaccaagagcgccctctcgaccaagagctggctttcggca
gccagcttccagcacaccacccacgtgctcaccgaggccgccattgccggcaagctggac
gagctcatcggcctgaaagaaaacgtgattctgggcaagctgattcccgccggtaccggc
tccgactttgtgcgcgacacccaggttatcgaccagaagaccctcaagcgcctcgaggag
gcccgccgcgaggccgagcaagcgcccctgaccccgcgccgtccgggggtgcgtccggaa
caacccgtgcgcgaggcctga
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