Meiothermus ruber DSM 1279: K649_14480
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Entry
K649_14480 CDS
T02636
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mre
Meiothermus ruber DSM 1279
Brite
KEGG Orthology (KO) [BR:
mre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mre03032
]
K649_14480
03400 DNA repair and recombination proteins [BR:
mre03400
]
K649_14480
Enzymes [BR:
mre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K649_14480
DNA replication proteins [BR:
mre03032
]
Prokaryotic type
DNA Topoisomerases
K649_14480
DNA repair and recombination proteins [BR:
mre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K649_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HemN_C
Lar_restr_allev
NMO
Toprim_4
Zn_ribbon_GRF
DUF2256
Motif
Other DBs
NCBI-ProteinID:
AGK06182
UniProt:
D3PSE4
LinkDB
All DBs
Position
complement(2908121..2910631)
Genome browser
AA seq
836 aa
AA seq
DB search
MPDSTLIVVESPAKAKSIQKMLGAGYEVRASKGHIADLPEHELGVDTQADFAPQYTVKKD
KQPIVEELKRAARGKRVLIATDPDREGEAIGWHVARLLGLNPQTPLRVEFHEITPKVVRA
AVQKPRPIDQSLVDAQQARRVLDRLVGYQLSPVLSMEFRRRALSAGRVQSVALRLLVERE
QEIEAFVPQEHWSLEGRFESEGQQFKAMLYSLGSERVQSGDKFLITSEKQAQEIARLAKD
VSGYRIGSIERRERRRNAPPPFITSTLQQAASSRLGWTASRTMRVAQKLYEGIDLPEGTV
GLITYMRTDSTRVSQEALAEVRAFIPRHFGPAYLPEKPNFFAGKKAANAQDAHEAIRPTS
TERTPDALRKHLSDEEYRLYQLIWQRFVASQMTPAVFDQTTVTVVGASGTPSGDLIFRAV
GSVLKFDGYLRVYGREEGDEAENRLPPLQENASARLLEVTPEQHFTEPPPRYTDASLVKT
LEEMGIGRPSTYAPTIDTLERRGYLERSGKSLKPTPLGREVTGYLIKSFPDVVAYDFTAQ
LESRLDEIEEGKAAWPKVVREFYEPFLKDFAKVPQKLCPKCGRPLELKVSRFGQFLGCTG
YPECKHTERLELKKEPEPIGEACPACGEGQLVRRHGRYGSFISCSRYPECKYTRDEAPST
GIECPKCHAGEVVQKTSKRGKPYYRCNNPACDFLSFDPLLPDKCPLCGWNEVAKGRSGKR
ACTNPGCERYGGPKLEALNQRRTKSSSKTSGTAKNKVKDRAKASATWADLEPFITKAGLT
PEQAEVARRTQGQQKQVAAVAKALNQPEEAVLKLFRQAMFKLRMEYGKARKEAVSA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccggattcaaccttaattgttgtggaatcacccgccaaagccaaaagcattcaaaaa
atgctgggcgctggctatgaggtgcgggccagcaaaggtcacatagccgatctgcccgag
cacgaactgggggtggatacccaggccgattttgcaccgcagtacactgtcaaaaaagac
aaacaacccattgtggaagagctcaagcgggcggctcgaggcaaacgggtgctcatcgcc
accgaccccgaccgcgagggtgaggccatcggttggcacgtggcccggctgctgggcctc
aacccgcaaacccctctacgggtggagttccatgagattacccccaaggtggtgcgggcc
gccgtgcagaagccacgcccaatagaccaaagcctggtcgatgcccagcaggcccggagg
gtgctggatcggctggtgggctaccagctctcgccggtgctgagcatggagtttcggcgc
cgggccctatcggcgggccgggtgcaatcggtcgcattgcggctgctggttgagcgggag
caggaaatcgaggcctttgttcctcaggaacactggagcctcgagggtcggttcgagtcg
gagggccagcagtttaaagccatgctgtacagcctgggctcggagcgggtgcagtccggc
gataaattcctgatcaccagtgaaaaacaggcccaggagatcgcccggctcgcaaaagat
gtctcaggttaccgcatcggcagcatcgagcgccgtgagcggcgccgcaatgcccctccc
cctttcatcacctcgaccctccagcaagcggccagcagcaggctgggctggacagccagc
cgcaccatgcgcgtggcccagaagctttacgaggggattgatctgcccgagggcaccgtg
ggcctcatcacctatatgcgcaccgactcaactcgagtctcgcaggaggccctggccgag
gtgcgggcctttatcccgcgccactttgggccggcctacctgcccgagaagcccaatttt
tttgcgggcaaaaaagccgccaacgcccaggacgcgcacgaggccatccgtcctacctcg
accgaacgaaccccagacgcgctgcgcaagcacctcagcgacgaggagtacaggttatac
cagcttatctggcagcgctttgtggcctcacagatgaccccagcggtttttgatcagacc
accgtgacggtggttggggccagtggaacccccagcggcgacctgatcttccgggcggtg
ggttcggtgctgaagttcgacggttacctgcgggtgtatgggcgggaagaaggcgacgaa
gccgaaaaccggctaccgcccctacaggaaaacgccagcgcccgcctgctggaggttacg
cctgagcagcatttcaccgagccgcccccacggtacaccgatgccagcctggtcaaaacc
ctcgaggagatgggcatcgggcggccttcgacctacgcccccaccatcgacaccctcgag
cgccggggttacctcgagcgcagcggcaagtcgctaaagcccaccccgctgggccgcgag
gttaccggctacctgattaagagcttccccgacgtggtggcctacgattttaccgcccag
ctcgagtcccgcctcgacgagatcgaggagggcaaagccgcctggcccaaggtggtgcgt
gagttttacgaacctttcctcaaggactttgccaaggtgccgcaaaaactctgccctaaa
tgcgggcggcccctggagctcaaggtctcgaggttcgggcagtttttgggctgcaccggc
taccccgagtgcaaacacaccgaacgcctcgagctcaaaaaagaacccgagcccatcggg
gaagcctgcccagcctgtggggagggtcaactggtgcgccggcacgggcgctacggcagt
tttattagctgtagccgctaccccgagtgcaagtacacccgcgacgaggccccttccacc
gggatcgagtgccccaaatgccacgcgggcgaggtcgtgcaaaaaaccagcaagcggggc
aagccttactaccgctgcaacaacccggcctgcgactttttatccttcgacccgttgctg
ccggacaagtgccccctttgcggttggaacgaggtggccaagggtcgcagcggcaagcgg
gcctgtaccaatccaggctgtgaacgctacggcgggcccaagctcgaggctctgaaccag
cggcgcacaaaaagcagcagtaaaacctccggtacagccaaaaacaaggtcaaggacagg
gccaaagccagcgccacctgggccgacctcgagcccttcatcaccaaagccggcctcacc
cccgagcaagccgaggtggcccgccgcacccagggccagcaaaagcaggtagctgccgtg
gccaaagccctcaatcagcccgaagaggccgtgttgaaactcttccgccaggccatgttc
aagctgcgcatggagtacggcaaggcccgcaaagaagcggtaagcgcctag
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