Muntiacus reevesi (Reeves' muntjac): 136149576
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Entry
136149576 CDS
T10466
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03030
DNA replication
mree03420
Nucleotide excision repair
mree03430
Mismatch repair
mree03440
Homologous recombination
mree03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136149576 (RPA1)
03420 Nucleotide excision repair
136149576 (RPA1)
03430 Mismatch repair
136149576 (RPA1)
03440 Homologous recombination
136149576 (RPA1)
03460 Fanconi anemia pathway
136149576 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mree03000
]
136149576 (RPA1)
03032 DNA replication proteins [BR:
mree03032
]
136149576 (RPA1)
03400 DNA repair and recombination proteins [BR:
mree03400
]
136149576 (RPA1)
Transcription factors [BR:
mree03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136149576 (RPA1)
DNA replication proteins [BR:
mree03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136149576 (RPA1)
DNA repair and recombination proteins [BR:
mree03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136149576 (RPA1)
MMR (mismatch excision repair)
136149576 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
136149576 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
IBR
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
136149576
NCBI-ProteinID:
XP_065766023
LinkDB
All DBs
Position
18:complement(38928425..38972781)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGSKIGNPMPYNE
GHGQQPVVPPPASAASPPASRPQQQSGSPGVASTASKAFGASKAFGKVGSTSQMNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNSETSVMPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILAVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYR
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgaaggggccattgcggccatcatgcagcagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggactgaatactctatcttctttcatgttggcaaca
cagctgaatcctcttgtggaggaagagcgattgtccagcaactgtatttgccaaattaac
cggtttattgtgaacacgctgaaagatggaaggagagtggttattttgatggagttagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaatccaatgccttataatgaa
ggacacggacagcagccagtagttcctcctcctgcctcagcagccagtccaccagccagc
agaccccagcagcagagtgggagcccaggagtggcttccactgcatctaaggcttttggt
gcttcaaaggcatttggaaaagttggcagtaccagccaaatgaacagctctgggggaaca
caggccaaagtggtacccatcgccagcctcaccccgtaccagtccaagtggactatttgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttttccatagaactggttgatgagagtggtgaaatcagagcgactgctttcaatgaa
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagctgtcaaaaacgactacgagatgaccttc
aacagtgaaacttctgtcatgccctgtgaagacggtcatcacttacccacagttcagttt
gatttcacggggattggcgacctggagagcaaatctaaagactcgcttgtagacataatc
ggtatctgcaagaactacgaagatgtcacaaaaatcatagtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggatatgtcagggaaagtggtgaacgctaccctg
tggggagatgatgctgataaatttgatggttctagacaacccgtgatggccattaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaacacc
aactggaaaactttatatgaggtcaagtcagagaacctgggccaaggcgacaagcctgac
tattttagctctgtggcaactgtggtgtatcttcgcaaagaaaactgtatgtaccaggcc
tgcccaactcaggattgcaacaagaaagtgattgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaatttcaagtaccgcatgattctggcagtcaatatt
gcagattttcaagagaatcagtgggtcacgtgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatctcggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcgaattaaggccacggtggtggacgtgaagcctgtggactacaga
gaatacggcagaaggctggtcatgaacatcaggaggaacgcggcgatgtga
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integrated database retrieval system
