Muntiacus reevesi (Reeves' muntjac): 136160548
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Entry
136160548 CDS
T10466
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136160548 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mree03019
]
136160548 (PARN)
Enzymes [BR:
mree01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
136160548 (PARN)
Messenger RNA biogenesis [BR:
mree03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136160548 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
Motif
Other DBs
NCBI-GeneID:
136160548
NCBI-ProteinID:
XP_065780441
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All DBs
Position
2:complement(192265797..192440170)
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AA seq
637 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALSYTSPNTSKCPVTIPDDQKKF
IDQVVKKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERRRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKSHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVPIAVNTSKYAESYRIQTYADYVGKKREEKQMKRKWTEDSWKEVEPKRLN
TQCVSYGLQNHHYANSLTATSIVGKRNLSPSRAEAGLEARVSGEISDTELEQTDPCAEPL
SEGRKKAKKLKRMKKDPSPTGSISDSSAKLFEVPDTW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatctccacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagcgatggaccttcagtc
accgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacaaagtcttttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagtttttcgcaacggaattccatacttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgagaagcgttcgcagtccaacggcgcaggtgctctgtcc
tacacgtctcctaacacttcaaagtgtcccgtgacaattcctgatgatcagaagaagttt
attgaccaagtggtaaagaaaatagaagatttattacaaagtgaagagaacaagaacttg
gacttagagccatgtactgggttccaaagaaaactgatttatcagactttgagctggaag
tatcccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgatatattgtt
atcagcaaagtagatgaagaagaacgcagaaggagagagcagcagaaacacgctaaggaa
caggaagaactgaatgatgctgtggggttttctagagtcattcatgccattgctaattcg
gggaagcttgtcattggacacaacatgctcttggatgtcatgcacacggttcatcagttc
tactgccctctgcccgcggacttaaatgaatttaaggagatgacaacatgtgttttcccc
aggctcttggacacaaaattgatggccagtacacaaccttttaaggatatcattaacaac
acatcccttgcagaattggaaaagcggttgaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggctttccaagttatgacacggcttctgaacagctccacgaggccggc
tatgatgcttatatcacaggactgtgtttcatctccatggccaactacctaggttctttt
cttagtcctccaaagagtcatgtatctgccagatcaaaactcatcgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcacgtcctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgacacgtca
gcatttgtttctctcagccagcctgaacaggtaccaattgctgtcaataccagcaagtat
gcagagagctatcgcatccagacctatgctgactatgtcgggaaaaaacgtgaggagaag
cagatgaagagaaagtggacagaagatagttggaaggaggttgagccaaagcggctaaac
acgcagtgcgtctcctatggtttgcagaatcaccattacgccaacagtctcacagccacc
agcatagtaggaaagagaaacctgagtcccagtcgagcagaagctggcctggaggcccga
gtatcgggggagatttctgacactgagcttgagcagacagatccctgtgcagaacctctc
tcagagggaaggaaaaaggccaagaaactaaaaaggatgaagaaggacccttctccgaca
ggaagcatctcagacagctcggccaagctcttcgaagtccccgacacgtggtaa
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