Muntiacus reevesi (Reeves' muntjac): 136161504
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Entry
136161504 CDS
T10466
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03030
DNA replication
mree03410
Base excision repair
mree03420
Nucleotide excision repair
mree03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136161504 (LIG1)
03410 Base excision repair
136161504 (LIG1)
03420 Nucleotide excision repair
136161504 (LIG1)
03430 Mismatch repair
136161504 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mree03032
]
136161504 (LIG1)
03400 DNA repair and recombination proteins [BR:
mree03400
]
136161504 (LIG1)
Enzymes [BR:
mree01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
136161504 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
136161504 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
136161504 (LIG1)
DNA replication proteins [BR:
mree03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
136161504 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
136161504 (LIG1)
DNA repair and recombination proteins [BR:
mree03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
136161504 (LIG1)
NER (nucleotide excision repair)
Other NER factors
136161504 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
136161504 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
PucR
Motif
Other DBs
NCBI-GeneID:
136161504
NCBI-ProteinID:
XP_065782486
LinkDB
All DBs
Position
2:complement(266932314..266958806)
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AA seq
917 aa
AA seq
DB search
MQRSIMSFFQPKKEGKVKKPEKETSNSIREMESSPKVALKERNRVVSEGDSPVKRPGRKA
TRVLGSEGEEEEEEAPTTPRSQKPASDSPQASPLSPVILPESSPSRSNPSPAVVSPSGIP
KRRTARKQLPKRTFRDVLKEQDEDEDPETKKKKEEEEAEIPTESLPEPEGGNKEEAEGGD
QPTMPLEPQKTATESSPESVSEPEVTVKQKPQEDGQAQLPPKAPKTLSSFFSPRKPAVKK
EAKEEGPGALRKEETKGHLDPPSYNPAKNNYHPIEDACWKAGQRVPYLAVARAFEKIEEV
SARLRMVETLSNLLRSVVALSPADLLPVLYLSLNRLGPPQQGLELGIGEGILLKAVAQAT
GRQLESVRAEVAEKGDVGLVAESSRSTQRLVLPPPALTAAGVFAKFRDIAQLAGSASTTK
KIDVIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPSQECPPALVD
AGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKP
MLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGRYPDII
SRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDL
IYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDMEQIAEFLEQSVKDSCEGL
MVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLAS
YDEESEEFQAICKLGTGFSDEELEEHHQRLQALVLPTPRSYVRADGAVAPDHWLDPSDVW
EVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQSQ
IQNQQGAEPDSEQEEFY
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtatcatgtcatttttccagcccaagaaagagggcaaagtgaagaagcca
gagaaggagacatccaacagcatcagagaaatggagtcctctccgaaggtggcgctgaag
gagcggaatagagtggtgtccgagggcgactctccagtgaagaggccggggaggaaggcg
acccgggtcctgggcagtgagggcgaggaggaggaggaggaagcccccaccaccccaaga
agccagaagcctgcttcagactctccacaggcctcacctctcagtcctgtcatactgcct
gagagcagcccttcccgctccaacccctctccagcggttgtctccccatcagggatcccg
aagcgtcgcacagcccggaagcagcttcccaaacggacatttcgagatgtgctgaaagag
caggatgaggacgaggacccagaaactaagaagaagaaggaggaagaagaagcagagata
ccaacagaaagcctcccagagcctgaagggggcaacaaggaggaagcggaaggcggggac
cagcccacgatgccccttgagccccagaagaccgccacagagtcctcgccagaaagcgtt
tcagagcccgaggtgacggtgaagcagaagccacaggaggacggccaggctcagctgccc
cccaaagcgccaaagaccctcagcagtttcttctccccccggaagccagctgtcaaaaaa
gaagcgaaagaagaaggacctggtgctctgagaaaggaggagaccaagggacacctggac
ccaccgagctacaatcctgccaagaacaactaccaccccatcgaagatgcctgctggaag
gcaggccagagggtcccttatctggctgtggcccgggcattcgagaagattgaggaggtc
tctgctcggctccggatggtggaaacgctgagcaacctgctgcgctccgtggtggccctg
tcacctgccgacctcctgcccgtcctctacctgagcctcaaccgcctggggccgccccag
cagggcctggagctcggcatcggagagggcatcctcctcaaggcggtggcccaggccacg
ggtcggcagctggagtccgtccgggccgaggtggccgagaagggtgatgtggggctggtg
gccgagagcagccgcagcacccagaggctcgtgctgcccccgcccgcactcaccgccgcc
ggcgtcttcgccaagttccgggacatcgcgcagctggcaggcagcgcttccacaaccaag
aagatagatgtcatcaaaggcctctttgtggcctgccgtcactcagaggcgcgtttcatt
gccagagccctgagcggacgactgcgcctcgggctggccgagcagtcggtgctggcggcc
ctcgcccaggctgtgagcctcacgccccccagtcaagaatgcccccccgccttggtggat
gccgggaagggcaagacggcagaagccagaaagacgtggctggaggagcaaggcatgatc
ctgaagcagaccttctgtgaggtgcctgacctggaccggatcgtccccgtgctgctggaa
cacggcctggagcggctcccggagcactgtagactgagcccaggggttcccctgaaacca
atgttggcccaccccacccggggtgtcagcgaggtcctgaagcgctttgaggaggcagct
ttcacctgcgagtacaaatacgatgggcagagggcacagatccacgttctggaaggcggg
gaagtgaagatcttcagcaggaatcaggaggacaataccggaaggtaccccgacatcatc
agccgcatccccaagattaaactcccatctgtcacatccttcatcctggacacagaagct
gtagcttgggaccgggaaaagaagcagatccaaccattccaagtgctcaccacccgcaaa
cgcaaggaggtggatgcggcagagatccaagtgcaggtgtgtctgtatgctttcgatctc
atctacctcaacggagagtccctggtacgtgagcccctctcccgacgccggcagctgctc
cgggagaacttcgtggagacagagggcgagttcgtctttgccacctccctggacaccaag
gacatggagcagattgccgagttcctggagcagtcggtgaaagactcctgcgaggggctg
atggtgaagaccctggatgtggacgccacctacgagattgccaagaggtcgcacaactgg
ctcaagctgaagaaggactacctcgagggtgtgggcgacaccctggaccttgtagtgatt
ggtgcctacctgggcaaggggaaacgggccggccggtacgggggcttcctgctggcctcg
tacgatgaggagagcgaggagttccaggccatctgcaagctcggaactggcttcagtgac
gaggagctggaagagcaccaccagaggctccaggccttagtgctgcccaccccgcgctcc
tacgtccgggccgacggcgcagtggccccggaccactggctggaccccagcgacgtgtgg
gaggtgaagtgcgcggacctctccctgtcccccatctaccctgcggcccggggcctggtg
gacagtgagaaggggatctccctccgcttccctcgatttattcgtgtccgtgaggacaag
aagccggagcaggccactaccagtgcccaggtggccggtctgtacaagaagcaaagtcag
attcagaaccagcagggtgctgagccagactccgagcaggaagagttctactag
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