Muntiacus reevesi (Reeves' muntjac): 136162719
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Entry
136162719 CDS
T10466
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136162719 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mree03021
]
136162719 (CPSF3)
03019 Messenger RNA biogenesis [BR:
mree03019
]
136162719 (CPSF3)
Transcription machinery [BR:
mree03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136162719 (CPSF3)
Messenger RNA biogenesis [BR:
mree03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136162719 (CPSF3)
U7-dependent histone pre-mRNA processing factors
136162719 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
136162719
NCBI-ProteinID:
XP_065783258
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All DBs
Position
3:18168677..18203507
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVILEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgattcctgcagaggagagtgaccagctgctgatccgaccccttggagctggg
caggaagtgggaagatcatgtattattctggagttcaaagggaggaaaataatgctggac
tgtgggatccaccctggcctggaaggaatggatgctcttccttatatcgatttgattgac
ccagctgagattgatctcctactaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagttagtaacatatcagcagacgac
atgctgtatactgagacagatttggaagaaagcatggacaaaattgaaaccatcaatttt
catgaagtgaaggaagttgcaggaatcaagttttggtgttaccacgccggccatgttctg
ggagctgccatgttcatgatcgagatcgcaggcgtgaagcttttatacacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaacattaaacctgatatt
cttatcattgaatctacttacgggacccatatccatgagaagcgagaggagcgagaagca
agattctgtaacaccgtccatgatattgtgaacagagggggccggggcctcattcctgtc
tttgctcttggacgggcacaagagctcctcttgattttagatgagtactggcagaatcac
ccagagctccatgatattccaatatactacgcatcgtctttggccaagaagtgtatggca
gtgtaccagacatatgtgaacgccatgaatgacaaaatccgcaagcagatcaacatcaat
aatccctttgttttcaaacatattagtaacctaaagagcatggatcattttgatgacatt
ggtcccagcgtggtcatggcctccccaggcatgatgcaaagtggcttatccagagagctc
tttgaaagctggtgtactgataagaggaacggtgtcatcatagccggctactgtgtagaa
ggcacactcgccaagcatatcatgtctgaaccagaagaaatcactaccatgtccgggcag
aagttacctctgaaaatgtctgttgactacatctctttctctgcgcacacagattaccag
caaaccagtgaatttattcgtgctttgaagccgcctcatgtgattttagtccatggagaa
cagaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttgaacttcagggga
gaaaaactagccaaggtcatgggctttttggcagacaaaaaaccagaacagggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtaaaacagacgcaagccattccatatact
ggtccttttaatttgctctattaccagctacagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaagcctgctttgaaagtgtttaaaaatattactgtaatacaggaacca
ggaatggtgatattagaatggttggcaaatccttccaatgatatgtatgcagatacagtc
acaaccgtgatactagaagttcagtcaaacccgaaaataaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgttagtgtaaaagatggttctattcttagtgtcacagtagat
ggaaaaactgctaacataaacttggagacacggactgtagaatgtgaagaaggcagtgag
gatgacgagtccctccgagaaatggtggaactggcagcccagagactgtatgaggccctc
acacccgtccactga
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