Muntiacus reevesi (Reeves' muntjac): 136166876
Help
Entry
136166876 CDS
T10466
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03082
ATP-dependent chromatin remodeling
mree04714
Thermogenesis
mree05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136166876 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
136166876 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
136166876 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mree03021
]
136166876 (SMARCC1)
03036 Chromosome and associated proteins [BR:
mree03036
]
136166876 (SMARCC1)
Transcription machinery [BR:
mree03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136166876 (SMARCC1)
Chromosome and associated proteins [BR:
mree03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136166876 (SMARCC1)
PBAF complex
136166876 (SMARCC1)
GBAF(ncBAF) complex
136166876 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
136166876
NCBI-ProteinID:
XP_065789900
LinkDB
All DBs
Position
4:109934458..110054568
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLGTTAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKPEGAEEEK
METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGPNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGSILGPRVPLTAPNGLYPPPPQQ
QPPPPAPADGGPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcgggctggggacgacggccggcgctgcgggcgcagga
ggcgcggcggcggccgcgggccttgcggtttatcggcggaaggacgggggcccggcgagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacacggatgctcctaccaataaaacactggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaaacatgttaccaacccggcc
ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaaatacaaaaatgaacaaggatggcggaggtttgatctgcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtt
cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca
aaagcttcccaccatgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgaggaaagacaagcaggtgttagtgcactgggggttttaccccgacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa
aaaccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggacgagaacaggaagcccgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcaccttcccctccgccccccacacccacagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaagtggttcttccaaagaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga
aaggaagatgaagatcctggcaaaggtgatcagagtagatcggttgaccctggtgaagat
aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat
aactgtattcatgtgattgaacgacgcgctcttcctgagtttttcaatggaaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgattgacacatatcgccta
aatccccaagaatatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgt
gctgtgatgagggttcatgcctttttagagcagtgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct
gataccccctcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag
caaatgttaaattttcccgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggacggaacaggagacccttctactcctggaggctctggagatgtataaggat
gattggaacaaagtgtcagagcacgttggaagtcgcactcaggatgaatgcatcctccac
ttcttgaggcttcccattgaggacccataccttgagaattctgatgcttccctggggccc
ctggcctaccagcccgtgcccttcagtcagtccggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggatcctcgtgtggcgtctgctgcagccaaagcggctctggag
gagttttctcgagtccgggaggaggtgccgctggaattggtggaggctcatgtcaagaag
gttcaagaagcagcccgagcctctgggaaggtggatcccacctatggtctggagagcagc
tgcattgcaggcacgggaccagatgagccggagaagccggaaggagctgaagaggaaaaa
atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaaaggggaaaatgaa
acggatgaaggtgataaagcacaagacggagaaaatgaaaaaaacagtgaaaaggaacag
gatagtgaagttagcgaggatactaaatcagaagaaaaggagactgaagagaacaaggaa
ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa
atttctgaaggaaatgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtagctctcctggtt
gagacacaaatgaagaaactggagattaaacttcgacattttgaagaactagaaactatc
atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag
aacttccacatggagcagctgaaatacgctgagttgcgagcccgacagcaaatggaacag
cagcagcacgggccgaaccctcagcaggcacaccaacactcgggaggacccggcctggcg
ccgctgggagcagcaggacatcccggcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccaccgcctcacccgccccagccaggtcagataccaggccca
ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc
atccacccccctgggagtggccccacccctcctggtatgcctccaatcccaggaagcatc
ttaggaccccgggtacccctgacggcacctaacggcttgtatccccctccaccacagcag
cagccaccacctccagcacctgcggatggaggccctccacctcctgctcctggtccacca
gcctcggctgcgccctag
DBGET
integrated database retrieval system
