Muntiacus reevesi (Reeves' muntjac): 136167339
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Entry
136167339 CDS
T10466
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03082
ATP-dependent chromatin remodeling
mree04714
Thermogenesis
mree05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136167339 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
136167339 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
136167339 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mree03021
]
136167339 (SMARCC2)
03036 Chromosome and associated proteins [BR:
mree03036
]
136167339 (SMARCC2)
Transcription machinery [BR:
mree03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136167339 (SMARCC2)
Chromosome and associated proteins [BR:
mree03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136167339 (SMARCC2)
PBAF complex
136167339 (SMARCC2)
GBAF(ncBAF) complex
136167339 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
136167339
NCBI-ProteinID:
XP_065790990
LinkDB
All DBs
Position
4:170982121..171001967
Genome browser
AA seq
1240 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETMGKDEDESSPGTKGEQTKNPELHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQNSASQQMLSFPDKGKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSQASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEDKKEPKEPREGGGIAEEEAKEKTSEPPKKDEEKGKDGDSEKE
SEKGDGDPTADPEKEKEPKEGQEEVLKEAVEPEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQPPPPPPALPPGSQPVPPPGAAGPPAVHGLAMA
PASVAPAPAGSGAPPGSLGPSEQLGQAGPTVGPQQQPPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPAPSIIPFGSLADSISINLPP
PNLHGHHHHLPFAPATLPPPNLPVSMANPPHPNLPATTTMPSLPLGPGLGSAAAQSPAIV
AAVQGNLLPTASPLPDPGTPLPPDPTAPSTGTVTPVPPPQ
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gccgaaccgcccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaggaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctcgctatgccacatacttgcagctgcctacaagttc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaacggtcactgaggataagaacagcgcttcccacgttgtgtatccc
gttccagggaacctggaggaagaggaatgggtccggccggtcatgaagagagataagcag
gttctcctgcactggggctactatcctgacagttatgacacatggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaagcctcggaaggttcatgcaaaa
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgacgaaagaagatttcagccaagacgctgacagatgag
gtgaacagcccagactcggaccgacgggacaagaaggggggcaactataagaagaggaag
cgctccccctcaccgtcaccgaccccagaagccaagaagaagaacgctaagaagggcccc
tcaacgccttacaccaagtcaaagcggggccacagagaggaggagcaggaggacctgacg
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtgacgctgcccaagaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgaccgacctg
gatgaacaagaggatgagagcatggagaccatgggcaaggacgaggacgagagcagcccg
ggcaccaagggggagcagaccaagaacccggagctgcacgaggacaacgtgaccgagcag
acccaccacatcatcatccccagctacgcggcctggtttgactacaacagtgttcacgcc
atcgaacggagggctctccctgagttcttcaatggcaagaacaagtccaagactccggaa
atctacctggcctatcggaacttcatgattgacacttaccggctgaacccccaagagtat
ctcacgtccaccgcctgtcgcaggaacctggcaggggatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtctcatcaactaccaggtggatgccgagagtcgacca
actcctatggggcctccgcccacctctcacttccacgtcttggcggacacaccgtctggg
ctggtgccgctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagaactccgcttcccagcaaatgctcagcttccctgacaaaggcaaggagaaaccg
gcggacatgcagaacttcgggctgcgcacggacatgtacacgaagaagaacgtgccctcc
aagagcaaagctgcagccagcgccactcgcgagtggacggagcaggagaccctgctgctc
ctggaggcgctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcacgcaggacgagtgcatcttgcatttcctccggcttcccatcgaagacccgtacctg
gaggactcacaggcctccctgggccccctggcctaccagcccatccccttcagccagtcc
ggcaaccctgtgatgagcaccgttgccttcctggcctctgtcgtcgatcctcgagtggcc
tcagctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtccccaca
gctttggtggaggcccacgttaggaaagtggaagaagccgccaaagtgacaggcaaggcg
gacccagcctttggtctggaaagcagtggcatcgcagggaccacctccgatgagccagag
aggatcgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggataag
aaggaacccaaggaacctcgagaaggaggtgggattgcagaggaggaagcgaaggagaag
accagcgagccgcccaagaaggacgaggagaaggggaaggacggcgacagcgagaaggag
tccgagaagggcgatggagacccgacagcggaccctgagaaggagaaggagcccaaggag
gggcaggaggaggtgctgaaagaagccgtggagccggagggggagcggaagacgaaggtg
gagcgcgacatcggcgagggcaacctctccaccgccgccgccgcagccctggccgccgcc
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggcc
ctgctggtggagacccagatgaaaaagctggaaatcaaactccggcactttgaggagcta
gagacgatcatggaccgggagcgggaagcgctggagtaccagaggcagcagctgctggcc
gacagacaagccttccacatggagcagctgaagtacgcggagatgcgggcccggcagcag
cacttccagcagatgcaccagcagccgccgccgccgccgccggccctgcccccaggctcc
cagccggtcccgcctcccggcgccgctgggccacccgctgtccatggcttggccatggct
ccagcctctgtggccccggctcccgcgggcagtggggcccctcctggaagcctggggccc
tcggaacagctcgggcaggcagggccaactgtggggccgcagcagcagccaccagctgga
gccccccagcctggggccgtcccaccaggggtaccgccccctggaccccatggcccctca
ccgttccccaaccaacaaactccctcaatgatgccaggggcagtgccaggcagcgggcac
ccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcctccc
gcgccatccatcatcccatttggtagcctagccgactccatcagtattaacctcccccct
cctaacctgcatgggcatcaccaccatctcccgttcgccccggccacgctccccccacct
aacctgcctgtgtccatggcgaaccctccacaccctaacctgccggcgaccaccaccatg
ccatctttgcctctcgggccggggctcggatccgccgcagcccagagccctgccattgtg
gcggctgttcagggcaacctgctgcccactgccagcccgctgccagacccaggcaccccc
ctgcctccagaccccacggccccgagcacaggcacagtcacccccgtgccacccccccag
tga
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