Muntiacus reevesi (Reeves' muntjac): 136171898
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Entry
136171898 CDS
T10466
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mree03041
]
136171898 (YTHDC2)
Enzymes [BR:
mree01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136171898 (YTHDC2)
Spliceosome [BR:
mree03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136171898 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
R3H
DEAD
HA2_N
Ank_2
AAA_19
AAA_22
nSTAND3
Ank
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
136171898
NCBI-ProteinID:
XP_065797022
LinkDB
All DBs
Position
7:2917230..2981814
Genome browser
AA seq
1429 aa
AA seq
DB search
MSRPSSVSPRPPAPGGAGGGPAPCCPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQ
REMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTH
NTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKR
GESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC
RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLM
AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHSTLKLILSSAALDVNLFIRYFG
SCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENT
FKPESQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKD
VDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGW
MALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDD
EKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFML
HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT
MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK
LLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHL
GKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALL
RAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV
NTNSENWAVVKAALVAGMYPHLVHVDRENIVLAGPKEKKVRFHPTSVLSQPQYKKIPPAN
GQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFR
ADGIPNDSSDSEMEDRTTANLATLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAP
SKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKS
SADTEFSDESTTAERVLMKSPAPALHQPQKYKDRGILHPKRSTEDRSDQSSVKSTDSSNY
PSPCASPSPPSSGKGSKSPSPKPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLN
RAFWESSVVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPF
QFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggccgagcagcgtctccccgcggccgccggctcccggtggggccgggggcggc
cccgcgccctgttgccctgggggcggcggccgtgccaaggggctgaaggacattcgtata
gacgaggaagtgaagattgcagtcaatatcgctctggagcgcttccgctatggggaccag
agagaaatggaatttccttcttctttgaccagtacagaaagagcctttattcatcgattg
agtcagtctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaact
gtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcat
aatacaaaacatgctgttaggagcctaattcagagatttcctgtcaccaataaagagcgt
actgaacttctgcctaaaacagaaagaggaaatgtgtttgctgttgaagctgaaaatcgg
gaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtaaaaaga
ggagaatctgaatttgattctttcagacaatctctgccagtgtttgaaaaacaagaggaa
attgttaaaataattaaggaaaataaagtagttttgattgtcggagaaactggatctgga
aagactacacagattcctcagttccttttagatgattgctttaaaaatggtattccctgc
cgtatattttgtactcaaccaagacgattagcagctattgctgtggctgaaagagttgct
gcagagaggagagaaaggattggtcaaacaattgggtatcagattcgtttagaaagcagg
gtttctccaaagacacttctgacattttgcaccaatggggtactgcttcgtacactgatg
gcaggagatagtacattgtcaacagtgacacatgttattgtggatgaagtacatgaaagg
gatcgatttagtgattttttacttacaaagttaagagatttactgcagaagcactcaact
ttgaaactaattctttctagtgctgccttagacgtaaatctttttattagatattttggg
agctgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttttggaa
gacattttaagaactactggatatacaaacaaagaaatgttaaaatacaaaaaggaaaaa
cagcgagaggaaaaacaacaaaccacacttacagaatggtactcagctcaagagaatact
ttcaagcctgaatctcagagacagagagctatcccaaatgtgactgaagagtatgattta
ttggatgatggtggtgacgctgtcttcagtcagctgacagaaaaagatgtgaattgtctt
gaaccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaagat
gttgatgcctttgctcaggtctttcaccttattttaactgaaaatgttagtgttgattat
agacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttctcaagt
caagtagaacagttaattagcatgggagccaatgttcacagtaaagcatcaaatggctgg
atggctttagattgggctaaacactttggtcagactgaaattgtggatcttctagaatct
tacagtgcttctttggaatttggaaatctggatgaaagctctttggttcaaacaaatggg
agtgatctcagtgcagaagacagagagcttctgaaagcttatcaccatagttttgatgat
gaaaaagtagacttggatttgattatgcatcttctatacaatatctgccatagttgtgaa
gctggtgcaatactgatttttctacctggatatgatgaaattgttggtctgagggatcgc
atcctgtttgatgacaagcggtttgctgataatgcacatagatatcaagtctttatgctt
cattcaaatatgcaaacatctgatcaaaagaaggtattaaaaaacccacctgcaggtgtt
cgaaaaataatcctttctacaaatattgccgaaaccagcatcacagtcaatgatgttgtc
tttgttattgattctggtaaggtgaaagagaaatcctttgatgcactgaattttgttaca
atgttaaaaatggtatggatttccaaagctagcgccatacaacgaaaaggcagggcaggg
cgatgcagacctggaatttgtttccggctgttcagtagacttcgattccagaatatgttg
gaatttcagactccagagcttttgaggatgccattacaggaactgtgtttacatacaaag
cttttagccccagttaattgtgctattgctgatttccttatgaaagctcctgaacctcca
ccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatggatgca
tgggaagatctcactgaacttgggtatcatttggctgacttgccagtagagccacatctt
ggtaaaatggtcctgtgtgctgttgttttgaagtgtctggatcccatccttacaattgcc
tgcacactagcttatcgagatccttttgtcctgccaactcaggcctctcagaaacgtgca
gctatgctttgtaggaaacgtttcactgcaggaactttcagtgaccacatggcacttctc
agagcattccaggcatggcagaaagctcgaagtgatgggtgggaacgagccttttgtgag
aagaattttctttcacaggctaccatggaaataatcatcggcatgagaactcagttgctt
ggtcagcttagagcgtcaggttttgtgagagcaagaggtggtggtgacattcgagatgtt
aacacaaattctgagaattgggctgttgttaaagctgcattggttgcaggcatgtatcct
catttagttcatgtggacagagagaatatagtattggcagggccaaaggagaaaaaagta
cggtttcatcccacttcagttctcagtcagcctcaatataaaaagattcctccagctaat
ggtcaaactgcggcaatccaggcactgcccacagattggctcatttatgatgaaatgacc
agagcccacagaatagctaacatcagatgctgctcagcagtgacgcctgtcactgtgctg
gtgttctgtgggccagcaaggctggcaagcaatgctcttcaggaaccttcatcttttcgt
gcggatggtattcctaatgacagtagtgatagtgagatggaagacaggactactgctaat
ttggcaactttaaaacttgatgagtggctcagtttcaaactagagccagaggcagccagt
ttattgctgcaacttagacagaagtggcacagcttgtttttacgtcgcatgagagctcca
tccaaaccttggtctcaagttgatgaagctactataagagcaattatagctgttttaagc
actgaagaacaatctgcaggcttacaacagccatctgggattggccaaaggccaagacct
atgtcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtaggaaaagt
tcagcagatactgaattttctgatgagtctactactgcagaaagagtactgatgaaatct
ccagctccagcactacaccaacctcagaagtataaagatagaggaattttgcatcctaaa
cgaagcactgaggaccggtcggatcaatcttctgtgaaatctacagacagcagtaattat
ccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctccttca
ccaaaaccaaacatgcctattcgatacttcataatgaagagtagcaatctgagaaacctt
gaaatttctcaacagaagggtatctggtccacaactcctagtaatgagcggaagctaaat
cgagccttttgggaaagcagcgtggtttacttggtattttctgttcaaggatctggacat
ttccagggattttctagaatgtcttctgagataggcagggagaagagtcaggattggggc
tcagctggacttggaggagtgtttaaggtggagtggatacggaaagaaagtcttcccttt
cagtttgcacaccatttactcaatccttggaatgacaacaagaaagtccagataagcaga
gatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgcctt
ccgttgggagaaaaaaccacaactgattaa
DBGET
integrated database retrieval system
