Muntiacus reevesi (Reeves' muntjac): 136173058
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Entry
136173058 CDS
T10466
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree04151
PI3K-Akt signaling pathway
mree04510
Focal adhesion
mree04512
ECM-receptor interaction
mree04518
Integrin signaling
mree04820
Cytoskeleton in muscle cells
mree04974
Protein digestion and absorption
mree05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
136173058 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136173058 (COL6A1)
04518 Integrin signaling
136173058 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136173058 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136173058 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
136173058 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
136173058 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mree04147
]
136173058 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
mree00536
]
136173058 (COL6A1)
Exosome [BR:
mree04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136173058 (COL6A1)
Glycosaminoglycan binding proteins [BR:
mree00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136173058 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
136173058 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
DUF1194
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
136173058
NCBI-ProteinID:
XP_065798387
LinkDB
All DBs
Position
8:25363530..25384696
Genome browser
AA seq
1027 aa
AA seq
DB search
MRLPLALLPLLLQVCWASAQDDTVASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLKDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGEPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGYPGLPGCKGSPGFDGVQGPPGP
KGDAGAFGLKGEKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA
PGEKGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGTEGPKGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPNIRSAQDLKEAIKKLQWMGGGTFTGEALQYTRSRLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLDDGFLKNITAQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDITKRFAKRLAERFLTASRTDPGQDVRVAVVQYSGTGQQRPERTALQFLQNYTVLA
NTVDSMDFFNDATDVMDALGYVTRFYRETSSSAAKKRLLLFSDGNSQGATPAAIEKAVQE
AQREGVEIFAVVVGRQVNEPHVRVLVTGKAAEYDVVFGERHLFRVPSYQALLRGVFYQTV
SRKVALD
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccccttgctctgctccccctgctgctgcaggtctgctgggcctccgcacag
gacgacaccgtggcctcgagggccatcgccttccaagactgccctgtggacctgttcttt
gtgctggatacctccgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggttaagtccttcaccaagcgcttcattgacaacctgaaggacaggtactaccgctgt
gaccgcaacctggtgtggaatgcgggcgcgctgcactatagcgacgaagtggagatcatc
cgcgggctcacgcgcatgcccagcggccgcgacgagctcaagagcagtgtggacgccgtc
aagtacttcgggaagggcacctacaccgactgcgccatcaagaagggtctggaggagctg
ctcgtggggggctcccacctgaaggagaacaaatacctgatcgtggtgactgatgggcac
cccctggagggctacaaggagccctgcgggggcctggaggatgctgtgaatgaggccaag
catctgggcatcaaagtcttctccgtggccatcacgcctgaccacctggagccacgtctg
agcatcatcgccacagaccacacgtaccggcgcaacttcacggcggccgactgggggcag
agccgcgacgccgaggaagtcattagccagaccatcgacaccatcacggacatgattaaa
aataatgtggagcaagtgtgctgctccttcgagtgccagcctgccagaggaccccccggg
cctcgaggcgaccccgggtacgagggagaaagagggaagccggggctcccaggagagaaa
ggagaagctggagaacctggaagacctggggacctcggacctgtcggctaccagggcatg
aagggagaaaaagggagccgaggggagaagggctccaggggacccaaaggctacaagggc
gagaagggaaagcgaggcatggacggcgtggatggcatgaagggggagacagggtacccc
ggcctgccaggctgcaagggctcgcccggattcgacggtgtccaaggaccccccgggccc
aagggcgacgcaggtgccttcggactgaaaggagagaagggtgagcccggagcagacggg
gagcctgggaggccagggagcacagggccccccggagatgagggtgagcccggagagccc
ggtcccccgggagagaagggagaagccggcgatgagggaaatgcaggaccagacggagcc
cccggagagaagggaggccctggggaaagaggacctcgagggaccccaggtgcgcggggc
ccaagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggtgtccccggtgacccgggtgaggctggccccattgggccgaaaggataccgaggtgat
gaggggcccccagggaccgagggccccaaaggagctccagggcctgcaggcccccccgga
gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggtaccgaaggt
ttccccggctttcctggctatccaggcagcagaggtcctcctgggataaacggcaccaaa
ggctaccccggcctcaagggggacgagggagaagctggggaccctggagaggacaataat
gacattgctccacgaggcgccaaaggagcaaagggctaccgaggtcccgaaggcccccag
ggacccccaggacacgtgggaccaccagggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcctgctgtgaatgcaagtgcgggcccatcgacatcctcttcgtgctg
gacagctccgagagcatcggcctacagaactttgagattgccaaggacttcatcgtcaag
gtcattgaccggctgagcagggacgagctggtcaagtttgagcctgggcagtcgcatgcg
ggcgtggtacagtacagccacaaccagatgcaggagcacgtggacctgagggaccccaac
atcaggagtgcccaggacctcaaggaagccatcaagaagctgcagtggatgggtgggggc
accttcacgggcgaggccctgcagtacacccggagccggctgctgccgcccacccagaac
aaccgcatcgccctggtcatcacggacggccgctcggacacccagagggacaccaccccg
ctcagcgtgctctgcggccctgacatccaggtggtctccgtgggcatcaaggatgtcttt
ggcttggccgcgggctctgaccagctcaacgtcatctcctgccaaggcctggcaccccag
ggacggccgggcatctcgctagtcaaggaaaactacgccgagctgctggacgacggcttc
ctgaagaacatcaccgcccagatctgcatagacaagaaatgtccagattacacctgcccg
atcaccttctcctccccggccgacatcaccatcctcctggacggctcagccagcgtgggc
agccacaactttgacatcaccaaacgctttgccaagcggctggcggagcgcttcctgaca
gcgagccggacagacccgggccaggacgtgcgcgtggcagtggtgcagtacagtggcacg
gggcagcaacggccggagcgcacagccctgcagttcctgcagaactacacagtgctggcc
aacaccgtggactccatggacttcttcaatgacgccaccgacgtcatggacgccctgggc
tacgtgacccgcttctaccgcgagacctcgtccagcgccgccaagaagaggctgctgctc
ttctcggatggcaactcgcaaggcgccacgccagccgccatcgagaaggcggtgcaggag
gcccagcgggagggtgtggagatctttgcggtggtggtgggccgccaggtgaacgagcca
cacgtgcgtgtcctggtcacgggcaaggcggcggagtatgatgtggtcttcggcgagcgc
cacctgttccgcgtgcccagctaccaggcgctgctgcggggcgtcttctaccagacggtg
tccaggaaggtggccctggactag
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