Muntiacus reevesi (Reeves' muntjac): 136174087
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Entry
136174087 CDS
T10466
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mree00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136174087 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mree03019
]
136174087 (PATL1)
Messenger RNA biogenesis [BR:
mree03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136174087 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
136174087 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
136174087
NCBI-ProteinID:
XP_065799974
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All DBs
Position
9:1226955..1254967
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AA seq
780 aa
AA seq
DB search
MSSSHNEAIVLIGKSLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHE
RLAELEEKLPAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTR
PVLQTQPGSLNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSER
ALPRRSTSPVIGSPPVKAVPIGTPPKQMSVPSFNQQILCPKPVHVRPPMPPRYPAPYGER
MSPNQLCSVPNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGS
PLAAMNPKLLQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNLRSQAPVF
RPDTTHLHPQHRRLLHQRQQQNRNQHRNLNGAGDRGGHRSSHQDHIRKDPYANLMLQREK
DWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLE
HTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTY
SLLLDVEDYERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQERPSDDHFVQIMCI
RKGKRMVARILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPPV
TVTSLLQQLMNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLVVLSRGEDLQSSDPASESAQ
SNPWTEVMFVATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctagtcataatgaagctattgtgttgattggtaagtctctggaggattgtcct
ctggatgaagatgaagatgcatttcagggcctgggagaggaggacgaagagattgatcaa
ttcaatgatgatacatttgggtcaggtgcagttgatgatgattggcaggaagcacatgag
cgcctggctgaactggaggagaaactgcctgcagcagttaatgaacaaaccggcaatggg
gaaagggatgagatggacttgttgggtgaccatgaggaaaatctggcagagaggctcagt
aagatggtgattgaaaatgaactcgaagacccagccatcatgagggcggtacagaccagg
ccagtgttgcaaacccaaccaggaagtctgaattccagcatctgggatggatctgaagtt
ctgaggcgaatccgaggacccctgcttgctcaggaaatgcctacagtgtctgtgttagaa
tatgccttgcctcagaggcccccccagggcccagaagacgatcgggacctttccgagcgc
gcattaccaaggcggtccacctcgcctgtcattgggagtcctcctgttaaagctgtcccc
ataggcaccccacctaagcagatgtctgtgcccagcttcaaccagcagattctgtgtcca
aagcctgtccatgttcggcccccaatgccaccacggtatcctgctccctatggtgagagg
atgtctccaaaccagctctgcagtgtcccgaactcctccctgctgggccaccctttcccc
cctagtgtccctcctgtcctcagccccctccagagagcacagcttcttggaggagcgcag
ctgcagcccggacggatgtctcccagccagtttgcacgggtccctggattcgtgggcagc
ccgcttgctgccatgaatcccaaactgttgcaagggcgagtcgggcagatgctccccccg
gcgccaggcttccgcgccttcttcagcgccccaccccccgctacaccgccacctccgcag
cagcacccacccggtccaggaccccacctgcaaaacctaagatcacaggccccagtgttt
agaccagacacaacccaccttcatccacagcaccgtcgactcttgcatcagagacagcaa
cagaatagaaatcagcatcggaatctcaacggtgcaggagacagagggggtcaccggagc
agtcatcaggatcatatccgaaaggatccatatgccaacctcatgctgcagcgagagaaa
gactgggtctctaaaatccagatgatgcaactgcaaagcactgatccctacctggatgat
ttttattaccagaattactttgaaaaactggagaaactgtcagctgctgaagaagtgcaa
ggtgatggcccaaaaaaggagcgtaccaagctcatcacgcctcaggtggccaagctggag
cacacctacaagccagtgcagtttgaaggctctttgggaaagctcactgtctctagtgtg
aataatccccgaaaaatgattgatgctgttgtgacatctcggagtgaggatgatgagaca
aaagaaaaacaggttcgggacaaaagacgaaaaacccttttcataattgagaaaacctac
agtttactgcttgatgtggaggattacgaaaggcgttacctcctaagtctggaagaagag
cgacctgccctgatggatgaaagaaagcacaaaatttgttgcatgtatgacaacttaagg
gggaaattgcctggacaggagaggccaagtgatgaccactttgtacagatcatgtgtatc
cgaaaggggaagagaatggtggcccggattctgcctttcctctccacagagcaagcagct
gacattctcatgacaacagccaggaacctccctttcctcatcaagaaggatgcacaggat
gaggtgctgccatgcctgttgagtcccttctctctcctcctctaccatcttccaccagtg
accgtcaccagccttctacagcagctgatgaacctacctcagagcgcagcggccccagct
ccgtccaacccgcacctctctgctgtgctccagaacaagttcggcctgtcactgctcctc
gtcgtcctgagccgcggggaagacctacagagctcagaccccgcttcagaatcggcgcaa
agcaacccgtggacggaggtgatgttcgtggcaacccgagaacttttgcggattccccag
acgggcctggccaagccaatctctatacccacaaacctagtatccctcttttctcgttat
gttgaccgacagaaactgaacttgctggagacaaaactgcagctagttcaggggatacgg
taa
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