Mycolicibacterium rufum: MJO55_04895
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Entry
MJO55_04895 CDS
T08167
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MJO55_04895 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_04895 (recC)
Enzymes [BR:
mrf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MJO55_04895 (recC)
DNA repair and recombination proteins [BR:
mrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJO55_04895 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ULP37775
UniProt:
A0ABY3UDT3
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All DBs
Position
1969917..1973168
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AA seq
1083 aa
AA seq
DB search
MALHLHRADRTDLLADGLAAMLAVPPPDPFAEDLVLVSARGTERWLSQRLSHVLGRGDGQ
DGVCAGITFRHPRSLVAELTGTTDDDPWAPDAMVWPLLDVIDGSLDQPWCATLATHLGHT
EQGEERELRQGRRYAVARRIAGLFASYARQRPQLLVDWAEGRTDALDADLRWQPELYRAL
LTRVDADPPPVRHAKTVVRLQDSATDLPARLSLFGHTRLPLTEVELLHALSAHHELHLWL
PHPSDDLWTALNGSHGPVPRSTDTSHRAVGHPLLATLGRDLRELQRALPPAPASDAFLGA
ADRPATLLGWLQTDIAANAIQTQGRSFDSADRSVQVHSCHGPARQVDVLREVLLGALADD
PTLEPRDILVMCPDIETFAPLIVAGFGLGDVVSGAHPAHRLRVKLADRALTQTNPLLGVA
SQVLALAEGRATASEVLNLAEAAPVRHRFGFTDDDLDTIGDWVREANIRWGFDREHRHPY
GVDFVQNTWRFGIDRVLAGVAMSEDAHAWLDTTLPLDDVGSNRVELAGRLAEYIELLRVS
VENLTGTRTLRAWLTALRSGLDHLTAAPDADAWQGAQVDREFADILTDAGAQAETQLRLA
DVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRQGVTDGDD
ALAREPMTGERDSRSEDRQLLLDAIGAATERLVITYTGANEYSGQRKPPAVPLVELLDVL
DVTTATPVRDHVHIRHPLQPFDVRNVTPGALGSPSGQPFTFDTTALTAAKVATAERTVKP
PLIGAPLPAPALDDVVLDDLVAFFKDPVKGFFRALDYTLPWDVDAVEDGIPVEIDALAEW
KIGDRMLEDMLRGMTPAQAQQAEWRRGSLPPGRLGWRQAQELAKRSAALAAAAQQHRTPE
PSAFDVDVAVGAGRRVTGTVPRVYGERMVAVTYSKLDGRHLLESWIRLVALTARHPGRDW
TAVCIGRPKRGDTPRQRLLGPPEDATELLTDLVAMYDEGRRAPIPLPPKTSYAWAETEHH
RGAPAREAGWKWKSGKYPGEDAEPAHVTVWGPGRPLVDLVAAGLPGYAARLWSPMLRAER
TPD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacacctccaccgggccgatcgcaccgacctgctcgccgacggcctggccgcg
atgctggccgtcccaccccccgacccgttcgccgaggacctcgtgctggtctcggcgcgc
ggcaccgaacgctggctgagccagcgcctctcccacgtgctcggccgcggcgacggccag
gacggcgtgtgcgccggcatcacgttccgtcacccgcgctcgctcgtcgccgagctgacc
ggcaccaccgacgacgacccctgggcgcccgacgccatggtctggccgctgctcgacgtc
atcgacggctcgctcgaccagccgtggtgcgcgacgctggccacccacctcggccacacc
gagcagggcgaggaaagggagctgcggcagggcagacgctacgccgtggcccgccggatc
gccggcctgttcgcctcctacgcccgccagcggccgcagctgctggtcgactgggccgag
ggccgcaccgacgcgctcgacgccgacctgcgttggcagcccgagctctaccgggcgctg
ctcacccgggtggatgccgacccgccgccggtccgtcatgccaaaaccgttgtccgactg
caggactcggccaccgatctgcctgcacggctgtcgctgttcggccacacccggctgccg
ctcaccgaggtcgagctgctgcacgcactcagcgcgcaccacgagctgcacctgtggctg
ccgcaccccagtgacgatctgtggacggcgttgaacggcagtcacggcccggtgccgcgg
agcaccgacacgtcgcaccgcgcggtgggccatcccctgctcgcgacgctgggtcgcgac
ctgcgcgagctgcagcgcgcgctgccgcccgcccccgcgtccgatgccttcctcggcgct
gcggatcgtccggcgacgctgctcggctggctgcagaccgacatcgccgcgaatgcgatt
cagacgcaggggcgttcgttcgacagcgcggaccggtcggtgcaggtgcacagctgccac
ggtcccgcgcggcaggtcgacgtgctgcgcgaggtgctgctcggggcgctcgccgacgac
cccacgctcgaaccccgggacatcctcgtcatgtgccccgacatcgagaccttcgccccg
ctgatcgtggcgggcttcggtctcggcgacgtggtgagcggagcgcatcccgcccaccgg
ctgcgcgtgaagctggccgaccgcgcgctcacccagaccaatcctctgctcggcgtggcc
tctcaggtgctcgccctggccgagggccgcgccaccgccagcgaggtgctcaatctcgcc
gaggccgctccggtccgacaccggttcggcttcaccgacgacgacctcgacaccatcggg
gactgggtgcgggaggccaacatccgctggggcttcgaccgcgagcaccggcatccctac
ggcgtcgacttcgtgcagaacacctggcggttcggcatcgaccgggtgctggccggggtg
gcgatgtccgaggacgcgcacgcctggctggacaccacgctgccgctcgacgacgtcggc
agcaaccgggtggagctggccggccggctcgccgagtacatcgaactgctccgcgtcagc
gtcgagaacctcaccggcacaaggactctgcgcgcttggctgacggcgctgcggtccggg
ctcgaccacctcaccgccgcccccgacgcggatgcatggcagggcgcccaggtcgaccgg
gagttcgccgacatcctcaccgatgccggcgcgcaggccgagacgcagctgcgcctggcc
gacgtcaaggcgctgctggaccgtcacctcgcgggccggcccacccgcgcgaacttccgc
acgggcacgctgacggtgtgcaccatggtgccgatgcgctcggtgccccatcgcgtggtg
tgcctggtcggcctggacgacggcgtgttcccccgccagggtgtgaccgacggcgacgac
gcgctggcgcgagagccgatgaccggcgagcgggacagccgctccgaggaccgccagttg
ctgctcgacgcgatcggcgcggccaccgagcgactggtcatcacctataccggcgccaac
gagtactcgggccagcgcaaaccgccggcggtgccgctggtcgaactgctcgacgtgctc
gacgtcacgacggccacacctgtccgcgatcacgtccacatccgacatccgttgcagccc
ttcgatgtccgcaacgtcacgcccggggcactgggctccccatcgggtcagccgttcacg
ttcgacaccaccgcgctcaccgccgcgaaggtcgcgaccgccgagcggacggtcaagccg
ccgctgatcggggcgccgctgcccgctccggcgctcgacgacgtcgtgctcgacgatctg
gtcgccttcttcaaggatccggtcaaggggttcttccgggcgctggactacacgctgccg
tgggatgtcgacgccgtcgaggacggcatacccgtcgagatcgacgcgctggcggagtgg
aagatcggcgaccgcatgctcgaggacatgctgcggggcatgacgccggcgcaggcacag
caggccgagtggcgccgcggttcgctgccgcccgggcgactcggctggcggcaggctcag
gagctcgcgaagcgctccgccgcactggccgccgcggcccagcagcaccgcacccccgag
ccgtcggcgttcgacgtcgacgtcgcggtcggggcgggccggcgggtgacgggcaccgtg
ccacgggtctacggcgagcgcatggtggccgtcacctactccaagctcgacggacggcac
ctgctcgagtcctggatccggttggtggcgttgaccgcccgtcatcccggccgggactgg
accgcggtgtgcatcggccggcccaagcgcggtgacacacctcggcagcggctgctcggt
ccgcccgaggacgccaccgaattgctcaccgatctcgtcgcgatgtacgacgagggccgt
cgcgcgccgattccgttgccgcccaagacgtcctacgcgtgggccgagaccgagcaccat
cgcggcgccccggcgcgggaggccggctggaagtggaagtcgggcaagtaccccggcgag
gacgccgaaccggcgcacgtcacggtctggggtcccggccgtccgctggtcgacctcgtc
gccgcgggactgcccgggtacgccgcccggctgtggtcaccgatgctgcgcgccgagagg
acgcccgactga
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