Mycolicibacterium rufum: MJO55_06625
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Entry
MJO55_06625 CDS
T08167
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf00020
Citrate cycle (TCA cycle)
mrf00190
Oxidative phosphorylation
mrf00650
Butanoate metabolism
mrf00720
Other carbon fixation pathways
mrf01100
Metabolic pathways
mrf01110
Biosynthesis of secondary metabolites
mrf01120
Microbial metabolism in diverse environments
mrf01200
Carbon metabolism
Module
mrf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MJO55_06625 (sdhA)
00650 Butanoate metabolism
MJO55_06625 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MJO55_06625 (sdhA)
00720 Other carbon fixation pathways
MJO55_06625 (sdhA)
Enzymes [BR:
mrf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MJO55_06625 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
Pyr_redox_2
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ULP38095
LinkDB
All DBs
Position
1627678..1629432
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AA seq
584 aa
AA seq
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MITEHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEE
DNWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGMPFNRTPEGRIDQRRFGGH
TRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAMTETPSGPVATG
VIAYELATGDIHVFHAKAIVFATGGSGRMYKTTSNAHTLTGDGLGIVFRKGLPLEDMEFH
QFHPTGLAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVLEVLE
GRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVKELVPVYPTCHYVMGGI
PTTVNGQVLRDNTTVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAANYAL
GHDFVDLPDKPADMVVGWVGDILSEHGNERVADIRGALQQSMDNNAAVFRTEETLKQALT
DIHALKERYARITVQDKGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDY
PNRDDTNYMRHTMAYKEGSDLLSDIRLDYKPVVQTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgattaccgaacatcgctatgacgtcgtgatcgtcggcgcgggcggcgccggcatgcgc
gccgccgtggaggccggcccgcgggtccgcaccgcggtgctgaccaagctgtaccccacc
cgctcgcacaccggcgcagcgcagggcggcatgtgcgccgcgctggccaacgtcgaagag
gacaactgggagtggcacaccttcgacaccgtcaagggtggtgactacctcgccgaccag
gacgccgtcgagatcatggccaaggaggccatcgacgcggtgctcgatctcgagaagatg
gggatgccgttcaaccgcacccccgagggccgcatcgaccagcgccgcttcggcgggcac
acccgcgatcacggcaaggcgccggtgcgccgtgcctgttacgccgcggaccgcaccggc
cacatgatcctgcagacgctgtaccagaactgcgtcaagcacgacgtcgagttcttcaac
gagttctacgccctcgacatcgcgatgaccgagacgccctcgggcccggtggccaccggc
gtcatcgcctacgaactggcgaccggcgacatccacgtcttccacgccaaggcgatcgtg
ttcgccaccggcggctcgggccggatgtacaagaccacgtcgaacgcgcacacgctcacc
ggcgacggcctgggcatcgtgttccgcaagggacttcccctggaggacatggagttccac
cagttccacccgacaggtctggcaggcctgggcatcctgatctccgaggctgtgcgcggc
gagggcggccgtctgctcaacggcgagggcgagcggttcatggagcgctacgcgcccacg
atcgtcgacctcgcgccccgcgacatcgtcgcccgctcgatggtgctcgaggtgctcgaa
ggccgcggcgccggaccgaacaaggattacgtctacatcgacgtgcgtcacctcggtgag
gacgtgctcgaggcgaagctgcccgacatcaccgagttcgcccgcacctacctgggcgtg
gaccccgtcaaggaactggtgcccgtctacccgacgtgccactacgtcatgggcggcatc
ccgaccaccgtcaacggccaggtgctccgggacaacacgaccgtcgtgccgggcctgtac
gccgccggcgagtgcgcctgtgtctcggtgcacggcgccaaccggctgggcaccaactcg
ctgctcgacatcaacgtgttcggccgccgcgccggcatcgccgccgccaattacgcactc
ggacacgacttcgtcgacctgccggacaagcccgccgacatggtggtcggctgggtcggc
gacatcctctccgagcacggcaacgagcgcgtcgccgacatccgcggcgcgctgcagcag
tcgatggacaacaacgccgcggtgttccgcaccgaggagacgctcaagcaggcactcacc
gacatccatgcgctcaaggagcgttacgcgcggatcacggtgcaggacaagggcaaacgc
tacaacagcgatctgctcgaggcgatcgagctcggcttcctgctcgagctggccgaggtg
acggtggtcggtgcgctcaaccgcaaggaatcgcgcggcgggcacgcccgcgaggactac
cccaaccgcgacgacaccaactacatgcgccacaccatggcctacaaggagggttcggat
ctgctcagcgacatccggctcgactacaagccggtggtccagacgcgctacgagccgatg
gaacggaagtactga
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