Mycolicibacterium rufum: MJO55_09640
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Entry
MJO55_09640 CDS
T08167
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mrf
Mycolicibacterium rufum
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrf03032
]
MJO55_09640
03036 Chromosome and associated proteins [BR:
mrf03036
]
MJO55_09640
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_09640
DNA replication proteins [BR:
mrf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MJO55_09640
Chromosome and associated proteins [BR:
mrf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MJO55_09640
DNA repair and recombination proteins [BR:
mrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MJO55_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Extensin_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ULP38643
LinkDB
All DBs
Position
complement(969682..970350)
Genome browser
AA seq
222 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPAEGPAVKRGVTATSTARKAAKKAP
AKKAAPAKKAPAKKAPAKKAAPAKKAAPAKKAPAKKAAPAKKAAPAKKAPAKKAATKAPA
KKAAPAKKAAPAKKAATKAPAKKAAPAKKAPAKKAPAKRGRK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcatcgacgtactcacggagaaattgggctcggatcgtcggcag
gcgaccgcagcggtggagaacgtcgtcgacaccatcgtgcgcgcggtgcacaagggtgac
agcgtcaccatcaccggcttcggtgtcttcgagcagcggcgccgcgccgctcgcgtcgcc
cgcaatccgcgcaccggcgagaccgtgaaggtgaagccgacgtctgtgcccgcgttccgt
cccggcgctcagttcaaagccgttgtctcgggcgcgcagaagcttccggccgaaggcccc
gcggtgaagcgcggcgtgaccgcgaccagcaccgcgcggaaggcggccaagaaggctccg
gccaagaaggccgctccggcgaagaaggctccggccaagaaggctccggccaagaaggcc
gctccggcgaagaaggctgcgccggcgaagaaggctccggccaagaaggcggcgccggcg
aagaaggccgctccggcgaagaaggctccggccaagaaggcagcgaccaaggctccggcc
aagaaggcggcgccggcgaagaaggccgcgcccgccaagaaggccgcgaccaaggctccg
gccaagaaggccgcgcccgccaagaaggcgcccgcgaagaaggctccggccaagcgcggt
cgcaagtag
DBGET
integrated database retrieval system
