Mycolicibacterium rufum: MJO55_09690
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Entry
MJO55_09690 CDS
T08167
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJO55_09690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_09690
Enzymes [BR:
mrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MJO55_09690
DNA repair and recombination proteins [BR:
mrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MJO55_09690
Prokaryotic type
MJO55_09690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ULP38651
LinkDB
All DBs
Position
complement(959977..960654)
Genome browser
AA seq
225 aa
AA seq
DB search
MTARALKDLVDESWAAALAPVEEQVAKMGEFLRAELAAGHRYLPSGANVLRAFTFPFDAV
RVLIVGQDPYPTPGHAVGLSFSVGADVRPLPRSLANIYTEYQQDLGYPAPTNGDLTPWSE
QGVMLLNRVLTVRPGTPASHRGKGWEAVTECAIRALVARRQPLVAVLWGRDAATLKPMLG
DTAIIESAHPSPLSASRGFFGSRPFSRANDILERSGAEPVNWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcacgcgctctcaaggatctggtcgacgaatcgtgggcggcggcactggccccg
gtggaggagcaggtcgcgaagatgggggagttcctgcgcgccgaactggcagccgggcac
cggtatctgccgtcgggcgcgaacgtgctgcgcgcgttcacgtttcccttcgacgcggtg
cgcgtgctgatcgtcggccaggacccctatccgacgcccggacacgcggtgggcctgagc
ttctcggtgggcgccgatgtccgcccgctgccccgcagcctggccaacatctacaccgag
taccagcaggatctgggctatccggcgccgaccaacggcgacctgacgccgtggtcggag
cagggcgtgatgctgctgaacagagtcctgaccgtacggcccggcacaccggcgtctcat
cgcgggaagggctgggaggcggtcaccgaatgcgccatccgcgccctggtggcgcggcgc
caaccgttggtggcggtgttgtggggacgcgacgccgcgacgctcaagccgatgctcggc
gacaccgcgatcatcgaatcggcgcacccctcgccgctgtcggcgtcacggggattcttc
ggatcacggccgttcagccgcgccaacgacatcctggaacgcagcggtgcggagccggtg
aactggcggctgccgtag
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