KEGG   Mycolicibacterium rufum: MJO55_13050
Entry
MJO55_13050       CDS       T08167                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mrf  Mycolicibacterium rufum
Pathway
mrf03030  DNA replication
mrf03410  Base excision repair
mrf03420  Nucleotide excision repair
mrf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MJO55_13050 (polA)
   03410 Base excision repair
    MJO55_13050 (polA)
   03420 Nucleotide excision repair
    MJO55_13050 (polA)
   03440 Homologous recombination
    MJO55_13050 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrf03032]
    MJO55_13050 (polA)
   03400 DNA repair and recombination proteins [BR:mrf03400]
    MJO55_13050 (polA)
Enzymes [BR:mrf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MJO55_13050 (polA)
DNA replication proteins [BR:mrf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MJO55_13050 (polA)
DNA repair and recombination proteins [BR:mrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MJO55_13050 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MJO55_13050 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 NYN_YacP DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: ULP39536
UniProt: A0ABY3ULK3
LinkDB
Position
complement(279753..282413)
AA seq 886 aa
MLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRDEQPSHIAAAFDVSRQ
TFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGALGITVLAEPGFEADDIIATLATQAEN
EGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPDAVVEKYGLTPSQYPDFAALR
GDPSDNLPGIPGVGEKTATKWIAEYGSLQALVDNVDKVKGKVGDALRAHLSSVVLNRELT
DLVKEVPLAQTPDTLRMQPWNRDQIHRLFDDLEFRVLRDRLFDTLASADPEVEEGFEVRG
EALQPGTLAAWLAERSGGGRFGLAVVGNHLAFDSDATAIAIVAPDGDGRYLDTATLDPGD
ETALVSWLADPGQPKALHEAKLAMHDLEGRGWPVSGITSDTALAAYLVRPGQRSFTLDDL
SLRYLKRELRADNPEQQQLSLLDDSEGVDDQAVQTLLLRASAVMDLADALDEELARIDSS
ALLGSMELPVQRVLAEIESAGIAVDLETLTELQSEFAGQIRDAAEAAYAVIGKQINLGSP
KQLQTVLFDELEMPKTKRTKTGYTTDADALQGLFEKTGHPFLQHLLAHRDATRLKVTVDG
LLGSVAGDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAFVVGGGYAELMT
ADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFDVPIDEVTPDLRRRVKAMSYG
LAYGLSAYGLSAQLKISTEEAKVQMDQYFARFGGIRDYLRDVVDQARKDGYTSTVFGRRR
YLPELDSSNRNVREAAERAALNAPIQGSAADLIKVAMINVDTAIKDAGLSSRMLLQVHDE
LLFEVVDGERDALEALVREHMGNAYPLNVPLEVSVGYGRSWDAAAH
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgctgttggacggcaactccctggcgttccgcgcgttctacgcgctgcccgccgagaac
ttcaagacccagggcgggttgaccaccaacgcggtctacggcttcaccgccatgctgatc
aacttgctccgcgacgagcagcccagccacatcgccgcggccttcgacgtctcgcgacag
acgttccgcaaggagaagtacccggagtacaaggagggccggtcggccacccccgacgag
ttccgcggacagatcgacatcaccaaggaagtgctgggggcgctcggcatcacggtgctc
gccgagcccggcttcgaggcggacgacatcatcgcgacgctggccacgcaggccgagaac
gagggctaccgggtgctggtggtcaccggggaccgggactccctgcagctggtcagcgat
gacgtcaccgtgctctatccgcgcaagggggtcagcgaactgacccggttcaccccggac
gccgtggtggagaagtacggcctgacaccgtcgcagtaccccgatttcgcggcgctgcgc
ggtgacccgagtgacaacctgccggggatcccgggggtcggggagaagacggccaccaag
tggatcgccgaatacggttcgctgcaggcactcgtcgacaacgtggacaaggtcaagggc
aaggtcggtgatgcgctgcgcgcgcacctgtcgagcgtggtgctcaaccgggagctgacc
gatctggtcaaagaggtgccgctcgcgcagacaccggacacgctgcggatgcagccgtgg
aaccgcgaccagatccaccggcttttcgacgacctggagttccgggtgttgcgcgaccgg
ctgttcgacacgctggcctcggcggacccggaagtcgaggagggcttcgaggtccgcggt
gaggcgctgcagccggggacgcttgcggcgtggctggccgagcgcagcggcggaggccgg
ttcgggctcgccgtggtgggcaaccacctggccttcgacagcgacgccaccgcgatcgcg
atcgtcgcccctgacggcgacggccgctacctcgacaccgccaccctggatccgggcgac
gagacggcgttggtgtcgtggctcgccgaccccggccagcccaaggccctgcacgaggcg
aagctcgcgatgcacgatctggagggccggggatggccggtgtccgggatcacctccgac
accgcgctggccgcctatctggtgcggcccgggcagcgcagcttcaccctcgatgacctg
tcgctgcgctatctgaagcgcgagctgcgtgcggacaaccctgaacagcaacaactttcg
ctactcgacgactccgagggggtggacgaccaggccgtgcagacgctgctgttgcgcgcc
agcgcggtgatggacctcgccgatgcgctcgacgaggagctggcccggatcgattcctcg
gcgctgctcggcagcatggaactgcccgtccagcgggtgctcgccgagatcgaaagcgct
ggcatcgccgtcgatctggaaaccctcaccgaactgcagagcgagttcgccgggcagatt
cgcgacgccgccgaggccgcatacgcggtgatcggcaaacagatcaacctcggctcgccc
aaacagctccagacggtgctcttcgacgagttggagatgccgaagaccaagcgcaccaag
accggatacaccacggatgccgatgccctacagggtcttttcgagaagacgggccacccg
ttcctgcagcatctgctcgcgcaccgggatgcgacccggctgaaggtcaccgtcgacgga
ctgctcggttcggtggccggagacgggcgaattcataccacgttcaaccagacgatcgcg
gcgaccggccggctgtcctcgaccgagccgaacctgcagaacatcccgattcgcaccgag
gcgggccggcggatccgtgacgcgttcgttgtcggtggtggctacgcggagctgatgacc
gcggactacagccagatcgaaatgcgcatcatggcgcacctgtcgggtgacgaaggcctg
atcgaggcgttcaacaccggggaggatctgcactcgttcgtcgcgtcgcgggcgttcgac
gtcccgatcgacgaggtgacgccggacctgcgccggcgggtcaaggcgatgtcctacggg
ctggcctacggcttgagcgcctacgggctctcggcgcagctgaagatctccaccgaagaa
gccaaggtccagatggaccagtacttcgcccgcttcggcgggatccgcgactacctgcgc
gacgtcgtcgatcaggcccgcaaggacggctacacctcgacggtgttcggacgccggcgc
taccttcccgaactggacagcagcaaccgcaacgtgcgggaggcggccgagcgggctgcg
ctcaacgctccgatccagggcagtgcagccgatctcatcaaggtcgcgatgatcaacgtc
gacacggcgatcaaggacgcggggctgtcgtcacggatgttgttgcaggtgcacgacgaa
ctgctgttcgaggtcgtcgacggtgagcgcgatgccctggaggcgctggtgcgcgagcac
atgggcaacgcatacccgctcaacgtgccgctcgaggtctcggtgggctacggccgcagc
tgggatgcggccgcacactga

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