KEGG   Mycolicibacterium rufum: MJO55_13105
Entry
MJO55_13105       CDS       T08167                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
mrf  Mycolicibacterium rufum
Pathway
mrf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MJO55_13105 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mrf03400]
    MJO55_13105 (uvrB)
DNA repair and recombination proteins [BR:mrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MJO55_13105 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MJO55_13105 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 AAA_19 DUF87 AAA_30 Helicase_RecD UB2H HEM4 AAA_7 AIG1
Other DBs
NCBI-ProteinID: ULP39258
LinkDB
Position
complement(268661..270823)
AA seq 720 aa
MAFATEHPVLAHSEYRPVDQVVRAGARFEVVSEYQPAGDQPAAIEELERRIRAGERDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYMDR
SVELTVGDEVPRDALLRLLVDVQYTRNDMSFTRGTFRVRGDTVEIIPSYEELAVRIEFFG
DEVEALYYMHPLTGDVIRQVDSLRVFPATHYVAGPERMAQAISTIEAELEDRLKELEGQG
KLLEAQRLRMRTNYDVEMMRQVGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVID
ESHVTVPQIGGMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGP
YELSQTGGEFVEQVIRPTGLVDPQVIVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKM
AEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLIGINLLREGLDLPEVSLV
AILDADKEGFLRSPRSLIQTIGRAARNVSGEVHMYADTMTDSMKQAIDETERRRAKQIAY
NEEHGIDPQPLRKKIADILDQVYREADDTDAAVEVGGSGRNASRGRRAPGEPGRAVSAGV
FEGRDTANMPRAELADLIKDMTAQMMAAARDLQFELAARIRDEIADLKKELRGMDAAGLK
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggctttcgcgactgaacatccggtgctcgcgcattcggagtaccggcccgtcgatcag
gtcgtgcgcgctggtgcgcggttcgaggtcgtcagcgaataccagcccgccggcgaccag
cccgcggccatcgaggagttggaacgccgtatccgggcgggggagcgcgacgtcgtgctg
ctcggtgccaccggtaccggcaagtcggcgaccacggcgtggctgatcgagcggctgcag
cggcccacgctggtgatggcgcccaacaagacgctggccgcacagctggccaacgagctg
cgagagatgttgccgcacaacgccgtcgagtacttcgtctcctactacgactactaccag
cccgaggcgtacatcgcccagaccgacacctacatcgagaaggacagctcgatcaacgac
gacgtggagcggctgcgccactcggccacgtcgagcctgctgtcgcgccgcgacgtcgtg
gtggtggcgtcggtgtcgtgcatctacgggctgggcacgccgcagtcctacatggaccgc
tcggtcgagctcacggtcggcgacgaggtgccccgcgacgcgctgctgcggctgttggtc
gatgtgcagtacacccgcaacgacatgtcgttcacccgcggtacgttccgggtgcgcggc
gacaccgtcgagatcatcccgtcctacgaggagctggccgtccggatcgagttcttcggc
gacgaggtcgaggctctctactacatgcatcccctcaccggcgacgtgatccgtcaggtc
gattcgctgcgggtgtttcccgcgacgcactacgtggcaggaccggaacggatggcgcag
gcgatctcgaccatcgaggccgagctcgaggatcgtctcaaggaactggagggtcagggc
aagctgctggaggcgcagcggctgcggatgcgcacgaactacgacgtcgagatgatgcgc
caggtcgggttctgttcgggcatcgagaactactcgcggcacatcgacggtcgtcccgcc
ggttcggcgccggccaccctgctggactatttcccggaggacttcctcctggtcatcgac
gagtcgcacgtgacggtgccgcagatcggcggcatgtacgaaggcgacatgtcgcgcaag
cgcaacctcgtcgacttcgggttccggctgccttcggcggtggacaaccgcccgctgacg
tgggaggagttcgccgaccgtatcggacagacggtgtacctgtcggccacaccgggcccc
tacgagctcagccagaccggcggtgaattcgtcgagcaggtcatccgcccgaccggtctg
gtcgatccgcaggtcatcgtcaagccgaccaagggccagatcgacgacctgatcggggag
atccgcaagcgcaccgagcgcgatgagcgggtgctggtcactacgttgaccaagaagatg
gccgaggacctcaccgactacctgctggagatgggcatccgcgttcggtatctgcactcc
gaggtggacacgttgcgccgcgtcgagctgctgcgacagctgcggctgggggagtacgac
gtgctgatcggcatcaacctgctccgcgaggggctagaccttcccgaggtgtccctggtg
gcgatcctcgacgcggacaaggaagggttcctgcggtcgccgcgcagcctgatccagacc
atcggccgcgcggcgcgcaacgtctccggcgaggtccacatgtacgccgacacgatgacg
gactcgatgaagcaggccatcgacgagaccgagcggcgccgggccaaacagatcgcctac
aacgaagagcacggcatcgacccgcagcccctgcgcaagaagatcgccgacatcctcgac
caggtgtaccgggaggccgacgacaccgacgccgcggtcgaggtggggggctcgggccgc
aatgcgtcgcggggccgccgtgcccccggcgagccgggccgggcggtcagcgccggagtg
ttcgagggtcgcgacaccgcgaacatgccgcgggcggaactggccgatctgatcaaggac
atgacggctcagatgatggccgcggcgcgggatctgcagttcgagctcgccgcccggatc
cgcgacgagatcgccgacctgaagaaggaactccgtggcatggacgcggccggcctcaaa
tga

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