Mycolicibacterium rufum: MJO55_16400
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Entry
MJO55_16400 CDS
T08167
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf00470
D-Amino acid metabolism
mrf00550
Peptidoglycan biosynthesis
mrf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MJO55_16400 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MJO55_16400 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrf01011
]
MJO55_16400 (murD)
Enzymes [BR:
mrf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MJO55_16400 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mrf01011
]
Precursor biosynthesis
Amino acid ligase
MJO55_16400 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
ApbA
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ULP34902
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Position
5312731..5314209
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AA seq
492 aa
AA seq
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MSGPDVMTPSGPLRPGAVVLVVGAGVTGRAVLAALAPLGVRATLTDDSPTALTAFAQQGV
AVVDPAGAVATIADVDLVVVSPGVPPTAPAAVAAATAGVPVWGDVELAWQLDRAGHHGPP
KSWLVVTGTNGKTTTTSMLHAMLCAAGRRAALCGNIGEPVLTVLDQPVDVLAVELSSFQL
HWAPSVRPDAGAVLNVAEDHLDWHGSLQAYAQDKARALTGRVAVGGLDNAIAARLLDESA
APRRVGFRLGEPAAGELGVIDGRLVDNAFAEMLVLADTDVIPVAGPVGVLDALGAAALAR
AVDVPADAIAEALATFAVGRHRAEVVTVADGVRYVDDSKATNPHAAQASISAYPRVVWVA
GGLLKGASVDDLVVAVADRLVGAVLIGRDRAVVREALSRHAPDVPVVTVVTGEDSGVVEN
AETPVTGVIRVVDTGGGPLAEAVMAAVVDAARGLARPGDTVLLAPAGASFDQFSGYGQRG
DAFAAAVRAAIG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcctgacgtgatgacaccgtcggggccgctgcggccgggagccgtcgtgctc
gtcgtcggggcgggcgtcaccggccgggcggtgctggccgcgctggcgccgttgggcgtg
cgcgccaccctcaccgatgacagcccgacggcgctgactgcgttcgcccagcagggggtc
gcggtcgtcgacccggccggcgcggtcgcgacgatcgccgacgtcgacctcgtggtggtg
agccccggtgttccgcccaccgcgcccgccgccgtcgccgctgcgacggccggcgtgccg
gtgtggggcgacgtcgagctcgcgtggcagctggaccgggccggccaccacggcccgccg
aaatcgtggctcgtcgtgacgggcaccaacggcaagaccaccaccacctcgatgctgcac
gcgatgctgtgcgccgcgggccggcgcgcggcgttgtgcggcaacatcggcgagccggtg
ctgaccgtgctcgaccagccggtggacgtgctcgctgtggagttgtcgagtttccagctg
cactgggcgccctcggtgcggcccgacgcgggcgcggtgctcaacgtggccgaggaccac
ttggactggcacggttcgctgcaggcttacgcgcaggacaaggcgcgggccctgacgggc
cgggtggcggtcggcgggctggacaacgcgatcgcggcccggctgctcgacgaatcggcc
gccccgcgcagggtcggcttccggctcggcgagcccgccgcaggtgagctcggcgtcatc
gacggccggctggtcgacaacgcgttcgccgagatgctggtgctcgccgacacggacgtc
atcccggtggcaggcccggtcggggtcctggacgcgctgggcgcggcggcgctggcgcgg
gcggtcgacgtgccggccgacgcgatcgccgaggcgctggcgacgttcgcggtgggccgg
caccgcgccgaggtggtcaccgtcgccgacggggtgcgctatgtcgacgattcgaaggcc
accaatccgcacgccgcacaggcgtcgatcagcgcctatccgcgggtggtctgggtggcc
ggcggcctgctcaagggcgcatcggtcgacgacctggtggtggcggtcgcggaccggctg
gtcggggctgtgctgatcggccgggaccgggccgtggttcgggaggcgttatcacgacac
gcaccggatgtccccgtcgtcacggtggtgacgggggaggattctggggtggttgagaat
gctgagacacctgtgactggtgtgatccgggtggtcgacaccggcggcgggccgctcgcc
gaggccgtgatggccgccgtcgtcgacgccgcccgtggcctcgcccggcccggcgacacg
gtgctgctggcgcccgcgggggcatccttcgaccagttcagcggttacggacagcgcggt
gatgccttcgccgcggccgtgcgtgccgcgatcggctag
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