Mycolicibacterium rufum: MJO55_21675
Help
Entry
MJO55_21675 CDS
T08167
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mrf
Mycolicibacterium rufum
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrf03032
]
MJO55_21675
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_21675
Enzymes [BR:
mrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJO55_21675
DNA replication proteins [BR:
mrf03032
]
Prokaryotic type
DNA Topoisomerases
MJO55_21675
DNA repair and recombination proteins [BR:
mrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJO55_21675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyphos_transf
Motif
Other DBs
NCBI-ProteinID:
ULP35833
LinkDB
All DBs
Position
4209414..4210433
Genome browser
AA seq
339 aa
AA seq
DB search
MRLARSKLDTPGIVRKRRGKGFAHYGPDGELLADPDTAQRIKDLVIPPAWKNVWISPRPN
GHIQAVGTDAAGRRQYLYHERWQLERAEEKFDRVLELSTRLPEWRARIASDLAGRGLTRD
RVLALALQLLDRGYFRAGGEQSAEEHEHYGLATLLCEHVTLKKNAVEFDYPAKSGVQRTV
EVDDPEVVRAVRSLMRRTERTDRLLVCRTGSSGWVDVKADDLNARFKEIVGDEFTVKDLR
TWHGTVLAAAAFADAKPPTSKTAAKRETSAVMKEVSSELGNTPAVARASYVDPRVVEGYE
RGMTIASATRRAEKIAEPDKAQGILETATRQLIRRVARG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggcgcgaagcaagctggacacaccggggatcgtccgtaagcggcggggcaag
ggcttcgcgcattacgggcccgacggagaactgttggccgacccggacaccgcgcagcgg
atcaaggatctggtgatccccccggcatggaagaacgtgtggatcagcccgcggcccaac
ggccacatccaggcggtggggaccgacgccgcagggcggcggcaatacctgtatcacgag
cggtggcagctggagcgggccgaggagaagttcgaccgggtcctggaactgtccacacgg
ctgcctgaatggcgagcgcggatcgcgagcgacctggccgggcgcggattgacgcgcgac
cgggtgctggcgctggcgctgcagctgctggatcgcgggtacttccgggccggcggtgag
cagtcggccgaggagcacgagcattacggactcgcgaccctgctgtgtgagcacgtgacg
ctgaagaagaacgccgtggagttcgattacccggccaagagcggcgtgcagcgcaccgtc
gaggtggacgatcccgaggtggtgcgcgcggtccgatcgctgatgcggcgcacggagcgc
acggatcgacttctggtgtgccgcaccggctccagcggatgggtcgacgtgaaggccgac
gacctcaacgcccggttcaaggagatcgtcggtgacgagttcacggtcaaggatctgcgc
acatggcacggcacggtcctggcggccgcggcgttcgccgacgccaagcccccgacctcc
aaaaccgccgccaaacgcgagacgtcggcggtgatgaaggaggtctcctcggaactcggc
aacaccccggcggtggcgcgggcgtcttatgtcgatccccgcgtggtcgagggctacgag
cgcggcatgacgatcgcgtcggcgaccaggcgcgccgagaagatcgccgaacccgacaag
gcccagggcatcctggagacggcgacccgtcagctgatccgccgggtggcgcgcggataa
DBGET
integrated database retrieval system
