Mycolicibacterium rufum: MJO55_22985
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Entry
MJO55_22985 CDS
T08167
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MJO55_22985
09124 Replication and repair
03420 Nucleotide excision repair
MJO55_22985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrf03021
]
MJO55_22985
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_22985
Enzymes [BR:
mrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJO55_22985
Transcription machinery [BR:
mrf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MJO55_22985
DNA repair and recombination proteins [BR:
mrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MJO55_22985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ULP39710
LinkDB
All DBs
Position
complement(3947794..3949443)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVL
RNKKIAPMLGARLDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPINLEQDGW
QLRDYQQMAADSFWDGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMMYATAEPDERYKLCATAHTKIAVVKSILNRHPDEPTLVIGAYLD
QLDELGAELDAPVIQGSTKTAERETLFDAFRRGEIRTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcccactgatcgtccaatcggacaagaccgtactgctcgaggtcgaccac
gagcaggcaggcgcagcgcgcgcggcgatcgcccctttcgccgaactcgaacgcgcgccc
gagcacgtgcacacctaccgcatcaccccgttggcgctgtggaacgcgcgggccgccgga
cacgatgccgaacaggtcgtcgacgcactggtgtcgttctctcggtacgccgtgccgcaa
ccgctgctcgtcgacatcgtcgacaccatggcgcgatacgggcggctgcaactggtgaag
catccggcacacggcctgacgttggtcagtttcgatcgagcggtgctcgaagaggtgctg
cgcaacaagaagatcgcccccatgctgggggcgcgcctcgacgacgacacggtgatcgtg
cacaacagtgaacgcggccgcgtgaagcagatgctgctcaagatcggctggccggccgag
gatctcgcgggttacgtcgacggcgaggcgcatccgatcaacctggagcaggacggctgg
caactgcgtgactaccagcagatggcggcggactccttctgggacggcggatccggcgtc
gtcgtgctgccgtgtggcgcgggcaagacgctcgtcggtgccgccgcgatggcgaaagcc
ggtgccacgacgctgattctggtcaccaacacggtggcgggacggcagtggaagcgggaa
ctgatcgcgcgcacgtcgctgaccgaagaggagatcggcgagtactccggggagaagaag
gagatccggccggtcacgatcgcgacctaccaggtcatcacgcggcgcaccaagggcgag
tacaagcacctggagttgttcgacagccgcgactgggggctgatcgtctacgacgaggtg
cacctgctgccggcgccggtgttccggatgaccgccgatctacagtcacggcggcggctg
gggctgaccgcgaccttgatccgcgaagacggccgcgagggcgatgtgttctcgttgatc
ggacccaagcgctatgacgccccgtggaaagacatcgaggcgcagggctggatcgcgccc
gccgagtgcatcgaggtccgcgtcaccatgacggacaacgagcgcatgatgtacgccacc
gccgagcccgatgagcgatacaagctctgcgcgaccgcgcacaccaagatcgccgtggtg
aaatcgatcctcaaccggcatcctgacgagccgacgctggtgatcggcgcctatctcgac
cagttggacgagctgggcgccgagttggacgcgccggtgatccagggctcgacgaagacg
gctgagcgcgagacgctgttcgacgcgttccggcgcggtgagattcgcacgctggtcgtg
tcgaaggtggcgaacttctccatcgaccttcccgaagccagcgtcgcagtccaggtctcg
gggaccttcgggtcacggcaggaggaggcgcaacggctgggacggctgctgcgtcccaag
gccgacggcggcggcgcggtgttctactccgtcgtgtcccgcgacagcctcgacgccgag
tacgccgcgcaccgccagcggttcctcgccgagcagggctacgggtacgtcatcaaggac
gccgacgacctgctcggcccggctctatga
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