Mycolicibacterium rufum: MJO55_24675
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Entry
MJO55_24675 CDS
T08167
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mrf
Mycolicibacterium rufum
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrf03032
]
MJO55_24675 (topA)
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_24675 (topA)
Enzymes [BR:
mrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJO55_24675 (topA)
DNA replication proteins [BR:
mrf03032
]
Prokaryotic type
DNA Topoisomerases
MJO55_24675 (topA)
DNA repair and recombination proteins [BR:
mrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJO55_24675 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Rep_1B
Motif
Other DBs
NCBI-ProteinID:
ULP36365
LinkDB
All DBs
Position
3603520..3606333
Genome browser
AA seq
937 aa
AA seq
DB search
MADADRDRGGNGRVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRNAADVPAKY
KSEPWARLGVNVEHNFEPLYIISPEKKSTVAELKDLLKNVDELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAEDPRDLDNALVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDAQATPPTFTAKL
NTVDGRRVASGRDFDSLGGLRKPDEVRVLDEASANALAAGLRGAQLQVASVEQKPYTRRP
YPPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSAINAARTQAQ
QLYGEEYVHPSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHAALDTDEFRLYELIWQR
TVASQMADARGTTLSLRIAGQATSGEQVVFNASGRTITFAGFLKAYVESLDEQAGGEADD
AESRLPNLTQGQRVDARDLTADGHTTSPPARYTEASLIKALEDLGIGRPSTYSSIIKTIQ
DRGYVHKKGSALVPSWVAFAVIGLLEQHFARLVDYDFTAAMEDELDEIAAGNERRTNWLN
NFYFGGEHGVDGSIARAGGLKKLVGGNLEEIDAREVNSIKLFDDAEGRAINVRVGRNGPY
LERMVADPDNPGELKPQRANLNDDLTPDELTLELAEKLFATPQEGRSLGIDPQSGHEIVA
KDGRYGPYVTEVLPEPPDDGDAGTTAKKGKKPTGPKPRTGSLLRSMDLETVTLEDALKLL
SLPRVVGVDPANGEEVTAQNGRYGPYLKRGTDSRSLATEEQMFDITLDEALKIYAEPKRR
GRQGGATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDARASEL
LADRRARGPVKKKAPAKKAAKKTAAKKAPAKKASKKA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgcagaccgcgaccgcggtggcaacggcagggtgcggcggctcgtcatagtc
gagtcgcctaccaaggcgcgcaaaatcgccggttatctcggttccaactacatcgtcgag
tcgtcccgcggccacatccgcgacctgccgcgcaacgcggccgacgtgcccgccaagtac
aaatccgagccctgggcccgcctcggggtcaacgtcgagcacaacttcgagccgctctac
atcatcagcccggagaagaagagcaccgtcgccgagctgaaggacctgctcaagaacgtc
gacgagctctatctggccaccgacggtgaccgcgagggcgaggccatcgcgtggcatctg
ctcgagacgctcaagccgcgcatccccgtcaagcggatggtgttccacgagatcaccgag
ccggcgatccgcgccgccgccgaagacccccgcgacctggacaacgccctggtcgacgcg
caggagacccgccgcatcctcgaccgcctctacggctacgaggtcagtcccgtgctgtgg
aagaaggtcgcgcccaagctgtcggcgggccgcgtgcagtccgtcgcgacgcgcatcatc
gtgcagcgcgaacgcgagcggatggcgttccgcagcgccggctactgggacgtcaccgcc
gaactggacgccagcgtctccgacgcgcaggccacaccgccgaccttcaccgccaagctg
aacaccgtcgacggccgccgcgtggccagtggccgcgacttcgactccctgggcgggctc
cgcaagcccgacgaggtccgcgtcctcgacgaggcgtcggcgaatgctctggccgccggc
ctgcgcggtgcgcagctgcaggtggcctcggtcgagcagaagccctacacccgcaggccg
tatccgccgttcatgacctcgacgctgcagcaggaggcgggccgcaagctgcggttctcc
tccgagcggacgatgagcatcgcccagcggctctacgagaacggctacatcacctacatg
cgaaccgactcgaccacgctgtcgcagtcggccatcaacgcggcccgcacccaggcccag
cagctctacggcgaggagtacgtccatccctcgccgcgccagtacacccgcaaggtgaag
aacgcccaggaggcgcacgaggccatccggcccgccggcgacgtcttccagacgccgggg
cagctgcacgctgccctggacaccgacgagttccgcctctacgagctgatctggcagcgc
accgtggcctcgcagatggccgacgcgcgcggcaccacgctgagcctgcgcatcgcgggg
caggccaccagcggcgagcaggtggtgttcaacgccagcggccgcacgatcacgttcgcc
ggcttcctgaaggcctacgtcgagagcctcgacgagcaggccggcggcgaggccgacgac
gcggagagccggctgccgaacctgacccagggtcagcgcgtcgacgccagggacctgacc
gccgacgggcacacgacgagcccgcccgcccgctacaccgaggcctcgctgatcaaggcg
ctcgaggacctgggcatcggccggccgtcgacgtacagctcgatcatcaagacgatccag
gaccgcggctacgtccacaagaagggcagtgcgctggtcccgtcgtgggtggcgttcgcc
gtcatcggcctgctcgagcagcacttcgcccggctggtggactacgacttcaccgcggcg
atggaagacgagctcgacgagatcgcggcaggcaacgagcgaaggaccaactggctcaac
aacttctacttcggtggcgagcacggcgtcgacggctcgatcgcgcgggccggtgggctc
aagaagctggtgggcggcaatctcgaggagatcgacgcccgagaggtcaactccatcaag
ctgttcgacgacgccgaaggtcgcgcgatcaacgtccgcgtcggccgcaacgggccgtac
ctcgaacgcatggtggccgatccggacaatcccggtgaactcaagccgcagcgcgccaac
ctcaacgacgacctgactcctgacgagctgacgctcgagctggccgaaaagctcttcgcc
acaccgcaagagggccgctccctggggatcgacccgcagagcggacacgagatcgtcgcc
aaggacggccggtacggcccgtatgtcaccgaggtcttgcccgagccgcccgacgacggg
gacgccggcacgacggcgaagaagggcaagaagccgacgggtccgaagccgcgcaccggg
tcgctgctgcgctccatggatttggagacggtgacgctcgaggacgcgctgaagctgctg
tcgctgccccgcgtggtcggggtggatcccgccaacggcgaggaggtcaccgcgcagaac
ggccgctacggtccgtacctcaagcgcggcaccgactcccggtcgctggccaccgaggag
cagatgttcgatatcaccctcgacgaggcgttgaagatctacgccgagccgaagcggcgc
ggccggcagggtggggccacaccgccgctgcgggagctgggtgtcgacccggtcagtgag
aagccgatggtgatcaaggacggccggttcggcccctacgtcaccgacggtgagaccaac
gcgagcctgcgcaagggcgacgacgtcgcatcgatcaccgacgcgcgggcctcggagctg
ctggccgacaggcgggcgcgcgggccggtcaagaagaaggctccggccaagaaggcagcc
aaaaaaactgcagccaagaaggcgccggccaagaaggcctccaagaaggcctga
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