Mycolicibacterium rufum: MJO55_25145
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Entry
MJO55_25145 CDS
T08167
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mrf
Mycolicibacterium rufum
Pathway
mrf03030
DNA replication
mrf03430
Mismatch repair
mrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJO55_25145
03430 Mismatch repair
MJO55_25145
03440 Homologous recombination
MJO55_25145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrf03032
]
MJO55_25145
03400 DNA repair and recombination proteins [BR:
mrf03400
]
MJO55_25145
Enzymes [BR:
mrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJO55_25145
DNA replication proteins [BR:
mrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJO55_25145
DNA repair and recombination proteins [BR:
mrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJO55_25145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ULP36442
UniProt:
A0A9X2Y934
LinkDB
All DBs
Position
3508222..3509217
Genome browser
AA seq
331 aa
AA seq
DB search
MSSTDARTWGRPADQGGSGWAVVDVETSGFRPGQARIVSVAALALSDDGNVEKSLYSLLN
PGVDPGPTHVHGLTAEMLEGQPTFGDVVGDLVEVLRGRTLVAHNVGFDYAFLTAEAELVQ
AELPVETVMCTVELARRLDLGLENLRLETLAAHWGVTQMRPHDALDDAMVLAQILKPVLV
RAQEHRKWLPVHPVSRRTWPNGRVTHEELRPLKAVAARLASRYANPGRFVAGRPLVQGMR
VALAEVGHTYEELIERILHAGLAYTEAVDAHTSLVVSDVAAPEQGKAYQARELGVPTVGS
DAFLRALQSVVGGTAVEDFADLDDDDQLALF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccaccgacgccagaacctggggcagacccgccgatcaggggggctccggttgg
gcggtcgtcgacgtggagacctcgggtttccggcccgggcaggcccgtatcgtgagcgtg
gccgcgctcgccctcagcgacgacggcaacgtggagaagagcctgtacagcctgctcaac
cccggggtcgatcccggtcccacccacgtgcacgggctgaccgccgagatgttggagggg
cagcccaccttcggtgatgtggtcggcgatctggtcgaggtgctgcgcggccgcacgctg
gtggctcacaacgtggggttcgactatgcgttcctgaccgccgaggcggagctggtgcag
gccgaattgccggtggagacggtgatgtgcacggtcgaactcgcgcgccggctggatctc
ggcctggagaacctgcggctcgagacgctggcggcgcactggggcgtcacgcagatgcgt
ccgcacgacgcactcgacgacgcgatggtcctcgcccagatcctcaaacccgttctcgtc
cgggcgcaggagcaccgcaagtggctcccggtgcatccggtgtctcggcgcacgtggccg
aacggccgggtcacccacgaggagttgcgcccgctcaaggcggtggcggcgaggttggcc
agccgctacgccaacccgggccggttcgtcgcgggccggccgctggtgcaggggatgcgc
gtggcgctggccgaggtcggccacacctacgaggaactcatcgagcgcatcctgcacgcg
gggctcgcctacaccgaagcggtggacgcgcacacctcactggtcgtcagcgacgtcgct
gctcccgagcagggcaaggcgtaccaggcacgggaactcggagtgcccacggtgggctcc
gacgcgttcctgcgcgcactgcaatccgtcgtgggaggcaccgccgtcgaggacttcgca
gacctcgacgacgacgatcagctggcgctgttctga
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