Microbacterium rhizosphaerae: SM116_00670
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Entry
SM116_00670 CDS
T09585
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00300
Lysine biosynthesis
mrg00470
D-Amino acid metabolism
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01230
Biosynthesis of amino acids
Module
mrg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SM116_00670 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SM116_00670 (lysA)
Enzymes [BR:
mrg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SM116_00670 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WPR89830
UniProt:
A0ABZ0SLX9
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Position
141180..142439
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AA seq
419 aa
AA seq
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MEHDILSLFPAGTTVDADGTLRIGGCRVDDLAAEFGTPAIVVDEGALRARAREYRDELTR
RWPHARAVFASKAFPATAVQRVMVEEGLGLDVAGGGEIKSALRAGVDPALVVLHGNAKST
EEIELAVSAGVGLVVVDNADDVDRLEAAVPAGRRQGVLVRIVPGVESSTHAHVQTGQIGS
KFGLTPPTASALIDRMRTSDRIEVRGVHAHVGSQIMDPAELAAAVAPLAAMGEFPVYDLG
GGLGARYTYAEHPASVDDYLDALIRAAREHLPAEAELIIEPGRSMVNGTAATLYTVTTVK
RDARTFVAVDGGMGDNLEVALFGQRYEASLAQRMNEQPTEEVVIVGRHCESGDVLIDPIV
LPEPRVGDLLAVPATGAYTHTMANNYNGYRRPPVVFAHDGEARAVIRRETWDDLFARDV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggaacacgacatcctctccctctttcccgcaggcacgacagtggatgccgacggcacc
ctgcgcatcggcggctgccgcgtcgacgacctggccgccgagttcggcacgccggcgatc
gtcgtcgacgagggagcgctgcgcgcccgcgcccgcgaataccgggacgagctcacccgg
cgctggccccacgcccgcgcggtgttcgcttcgaaggccttcccggcgacagcggtgcag
cgggtcatggtcgaggaggggctcggactcgacgtcgccggaggcggtgagatcaagagc
gcgctgcgcgccggcgtcgatccggcgctcgtcgtgctccacggcaacgccaagtcgacc
gaggagatcgagctggccgtgagcgcgggcgtcggactcgtcgtcgtcgacaacgcagac
gacgtcgaccgactggaggcggcggtgcctgcggggcggcggcagggggttctcgtgcgg
atcgtcccgggcgtcgagtcatccactcacgcgcacgtgcagaccggtcagatcggctcg
aagttcggcctcacgccgccgaccgcgagcgcgctgatcgaccggatgcgcacgagcgac
cgtatcgaggtcaggggcgtccacgcgcacgtgggctcacagatcatggatccggcggag
ctcgcggcggccgtcgctccgctcgcggcgatgggcgagttcccggtctacgacctcggc
ggcggcctcggcgctcggtacacgtacgccgagcacccggcatccgtcgacgactatctg
gacgcgctcatccgggcggcgcgcgagcacctgcccgcggaggccgagctcatcatcgag
ccgggccgcagcatggtgaacggaaccgcggcgacgctgtacacggtcacgaccgtgaag
cgggatgcgcgcaccttcgtcgccgtcgacggcgggatgggcgacaacctcgaggtcgcc
ttgttcgggcagcgctacgaggcatccctcgcccagcgcatgaacgagcagccgaccgag
gaggtcgtgatcgtcgggcggcactgcgagagcggcgacgtcctcatcgacccgatcgtc
ctgccggagccccgcgtcggcgacctgctggccgtgccggcgaccggcgcgtacacgcac
acgatggccaacaactacaacggctaccgccggccgcccgtggtgttcgcacacgacggc
gaagcccgcgccgtcatccgccgcgaaacctgggacgacctcttcgcgcgcgacgtgtga
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