Microbacterium rhizosphaerae: SM116_00695
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Entry
SM116_00695 CDS
T09585
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SM116_00695 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_00695 (recQ)
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_00695 (recQ)
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM116_00695 (recQ)
Messenger RNA biogenesis [BR:
mrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SM116_00695 (recQ)
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SM116_00695 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WPR89835
UniProt:
A0ABZ0SMW6
LinkDB
All DBs
Position
complement(148888..150768)
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AA seq
626 aa
AA seq
DB search
MDAGQRVVDARSVLHEVYGYDEFRGDQAAIVDHVIAGGDAVVLMPTGAGKSVTYQVPALV
RPGTGLVVSPLIALMHDQVDALVANGVRAAYLNSTQSIDERRAVDRAYLDGELDLLYVAP
ERLGTLRQAQGPNQAQGPNQAQGPNQTIAFLQRGELSVIAIDEAHCVSQWGHDFRPDYLT
LGGLADAFPGVPRMALTATATRETHREITKRLRLPDARHFVASFDRPNIQYRIEPKVDAR
RQLLAFIRSFPDAAGIVYALSRKSVDQIADYLAGQGIDALPYHAGLPAEQRAANQSRFLR
EDGVVMVATIAFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGEPSIAWMAYGLGD
VVQQRRLIEASPGDRTFKTRLGQHLDAMLALCETVGCRRQNLLGYFGEVSEPCGNCDTCL
TPPETWDGLIPSQKLLSTIVRLQRERGQSYGAGQLIDILRGASTERVRQLNHDTLATFGI
GADLSEQDWRSVVRQLLARGFLVARGEYGTLGLTDASAGVLRGDAAVPLRRDVLGRAGAT
RSRKPAASDSVATANQPLFEALRAWRADTAREQGVPAYIVFGDATLRALAEQRPVTLADL
DGISGIGAKKREAYGEAVLAVVAASA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccgggcagcgggttgtggatgcgcgctcggtgctgcacgaggtctacgggtac
gacgagttccgcggcgaccaggcggcgatcgtcgaccatgtgatcgcgggtggcgatgcg
gtggtcctgatgccgaccggcgcgggcaagagcgtcacgtaccaggtgcctgccctcgtc
cggcccggcacggggctcgtggtcagtccgctcatcgcgctcatgcacgatcaggtggat
gcgctggtcgccaacggcgtgcgcgccgcgtacctcaactcgacccagtccatcgacgag
cggcgggcggtcgaccgcgcctacctcgacggagagctcgacctgctgtatgtcgcgccc
gagcgcctcggcacccttcgacaggctcagggaccgaaccaggctcagggaccgaaccag
gctcagggaccgaaccagaccatcgcattcctgcagcggggagaactgagcgtcatcgcc
atcgacgaggcgcactgcgtctcgcagtggggccacgacttccggcccgactacctgacc
ctcggcggcctcgccgacgcgttccccggcgtgccgcgcatggcgctcaccgcgacggcc
acgcgcgagacgcaccgcgagatcaccaagcgcctgcggctgcccgacgcccggcacttc
gtcgcgagcttcgaccggcccaacatccagtaccgcatcgagccgaaggtcgacgcgcgc
cgtcagctgctcgcgttcatccggtcgttccccgacgccgccggcatcgtctacgccctc
agccgcaagtccgtcgaccagatcgccgactacctcgccggtcagggcatcgacgcgctg
ccgtaccacgccggactgcccgccgagcagcgggcggcgaaccagtcccggttcctccgc
gaagacggcgtcgtcatggtcgcgacgatcgccttcggcatgggcatcgacaagcccgac
gtgcggttcgtcgcacacgtcgacctgccgaaatcggtcgagggctactaccaggagacc
ggccgcgccggccgcgacggcgagccgtcgatcgcctggatggcctacggcctcggcgac
gtcgtgcagcagcgccggctgatcgaggcatcccccggcgaccgcacgttcaagacgcgg
ctggggcagcacctcgacgccatgctcgctctgtgcgagacggtgggatgccggcgccag
aacctgctcggctacttcggcgaggtctccgagccgtgcggcaactgcgacacctgcctc
acgccgcccgagacgtgggacgggctcatcccgtcgcagaagctgctctcgacgatcgtc
cggctgcagcgcgagcgcgggcagtcgtacggcgccggccagctcatcgacatcctgcgc
ggcgcatccaccgagcgcgtccgccagctgaaccacgacacgctcgcgaccttcggcatc
ggcgccgacctctccgagcaggactggcggagcgtcgtgcgccagctgctcgcgcgcggg
ttcctcgtggcgcggggcgagtacggcaccctcgggctcaccgatgcgagcgccggcgtg
ctgcgcggagacgcggcggttccgctgcgccgcgatgtgctcggccgcgcgggcgcgacc
aggtcgcgcaagcccgcagcatccgactcggtcgccactgcgaaccagccgctgttcgag
gcgctccgcgcgtggcgcgccgataccgctcgggagcagggggtgccggcgtacatcgtc
ttcggggatgcgacgctccgggcgctggccgagcagcggcctgtgacgctcgcagacctc
gacggcatcagcgggatcggtgcgaagaagcgcgaggcctacggcgaggccgtgctcgct
gtggtcgccgcctccgcatga
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