Microbacterium rhizosphaerae: SM116_00785
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Entry
SM116_00785 CDS
T09585
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrg03032
]
SM116_00785
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_00785
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SM116_00785
DNA replication proteins [BR:
mrg03032
]
Prokaryotic type
DNA Topoisomerases
SM116_00785
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SM116_00785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WPR89853
LinkDB
All DBs
Position
complement(174475..175470)
Genome browser
AA seq
331 aa
AA seq
DB search
MARLRRVRPLEDAGIRRVRRGRGFQYVDAAGRPASNKDRKRIDALVIPPAWTDVWISEHE
RGHIQAVGTDDAGRRQYIYHPDWVKRRDRGKYERMLALAKALPSARARVTRSLRSDELGR
ERVLATAFRLLDEAAPRIGSERYFAENGNRGLTTLQRRDASVDGTTVTLSFPGKGGKRQD
IEVEDPALAAVIAELVGGPPRSPLLAYRRGRRRIPVRPKDVNDYVRELTGGRFSAKDFRT
LRGTIAAAEALARSGVPATERDRRKAEQDAVKATSELLGNTPTVARNSYIDPRVWVRYKD
GDLLDLSGSPEAAIGRLLRPVRQEAPTATFR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcacgactgcgtcgcgtccgccccctggaggacgccggcatccggcgcgtgcgccgc
gggcgcggcttccagtacgtcgacgcggcgggccgccctgcctcgaacaaggatcgcaag
cgcatcgacgcgctcgtcatcccgcccgcctggaccgacgtgtggatcagcgagcacgag
cgcgggcacatccaggcggtcggcaccgacgacgccgggcggcgccagtacatctaccac
ccggactgggtgaagcgccgcgaccgcggcaagtacgagcgcatgctggcgctggcgaag
gcccttccctcggcgcgagcccgcgtgacgagatcgctgcgctcggatgagctcggtcgc
gagcgcgtgctcgcgaccgccttccggctgctcgacgaagcagccccgcgcatcggctcg
gaacgctatttcgcggagaacggcaaccgcggactcacgaccttgcagcggcgggatgcg
tctgtcgacggcacgaccgtcaccctgagctttcccggcaagggcggcaagcgccaggac
atcgaggtcgaggacccggccctcgccgccgtcatcgccgagctcgtcggcggaccgccg
cgatcgccgctcctggcgtaccggcggggacggcgccgcatccccgtgaggcccaaggac
gtcaacgactacgtccgcgagctcaccgggggccgcttctccgcgaaggacttccggacg
ctccgcggcaccatcgcggctgcggaggcgctcgcgagatcgggggtcccggcgaccgag
cgtgaccgccggaaggccgagcaggacgccgtgaaggcgacctccgagctgctcgggaac
accccgaccgtcgcccgcaactcgtacatcgatccacgtgtctgggtgcggtacaaggac
ggcgacctgctcgacctctcgggctctccggaggcggcgatcgggcggctcctgcggccc
gtgcgacaggaggcacccacagcgaccttcagatga
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integrated database retrieval system
