Microbacterium rhizosphaerae: SM116_04920
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Entry
SM116_04920 CDS
T09585
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00020
Citrate cycle (TCA cycle)
mrg00640
Propanoate metabolism
mrg00660
C5-Branched dibasic acid metabolism
mrg00720
Other carbon fixation pathways
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01200
Carbon metabolism
Module
mrg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SM116_04920 (sucD)
00640 Propanoate metabolism
SM116_04920 (sucD)
00660 C5-Branched dibasic acid metabolism
SM116_04920 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SM116_04920 (sucD)
Enzymes [BR:
mrg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SM116_04920 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
DapB_N
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
WPR90636
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All DBs
Position
1114705..1115607
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AA seq
300 aa
AA seq
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MTIFLNKDSKVIVQGITGGEGSKHTARMLAAGTQVVGGVNARKAGTTVLHTAKDGSDVEL
PVFASVAEAIAATGADVSIAFVPPAFTKDAVVEAIEAEIPLLVIITEGVPVQDSAEFWAL
AKAKGGKTRIIGPNCPGIISPEESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRDFG
FSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAAEFIKANVTKPVV
GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVQVGKTPSETADLMREIIRGL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcttcctcaacaaggactccaaggtcatcgtccagggcatcaccggcggcgag
ggatcgaagcacacggcccgcatgctcgcggccggcacccaggtcgtgggcggcgtgaac
gcccgcaaggccggcaccacggtgctgcacacggcgaaggacggctccgatgtggagctg
cccgtcttcgcgtccgtcgccgaggccatcgcggcgaccggcgccgacgtctcgatcgcg
ttcgtgcctccggcgttcacgaaggacgccgtcgtcgaggccatcgaggccgagatcccc
ctgctcgtcatcatcaccgagggcgtgcccgtgcaggactccgccgagttctgggcgctc
gcgaaggccaagggcggcaagacccgcatcatcggcccgaactgccccggcatcatcagc
cccgaggagtcgctcgtcggcatcaccccggcgaacatcaccggcaagggccccatcggc
ctggtctcgaagtcgggcaccctgacgtaccagatgatgtacgagctgcgtgacttcggc
ttctcgacggccatcggcatcggcggcgacccggtcatcggcaccacgcacatcgacgcg
ctcgctgcgttcgaggccgaccccgagaccaaggcgatcgtcatgatcggcgagatcggc
ggcgacgccgaggagcgcgcggccgagttcatcaaggccaatgtcacgaagccggtcgtc
ggctacgtcgcgggcttcaccgcccccgagggcaagacgatgggccacgccggcgccatc
gtgtccggttcggccggcaccgcgcaggcgaagaaggaggccctcgaggccgcgggcgtc
caggtcggcaagacgccgtccgagaccgccgacctgatgcgcgagatcatcaggggtctc
tga
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