Microbacterium rhizosphaerae: SM116_05000
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Entry
SM116_05000 CDS
T09585
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00020
Citrate cycle (TCA cycle)
mrg00480
Glutathione metabolism
mrg00720
Other carbon fixation pathways
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01200
Carbon metabolism
mrg01210
2-Oxocarboxylic acid metabolism
mrg01230
Biosynthesis of amino acids
mrg04146
Peroxisome
Module
mrg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrg_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SM116_05000
09102 Energy metabolism
00720 Other carbon fixation pathways
SM116_05000
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SM116_05000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SM116_05000
Enzymes [BR:
mrg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SM116_05000
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
WPR90651
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Position
1134963..1137179
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AA seq
738 aa
AA seq
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MPDSTIIYTHTDEAPALATASFLPIVQAVTRQAGVDIETRDISLAGRILAAFPQKLTPEQ
QVGDALAELGGLATLPEANIIKLPNISASIPQLKAAIAELQGQGYDIPDYPDEPQSLDEK
DVRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRNKAFAAGSRTRVATMGHDD
FRSNEKSVVIPSDDVLTIQHVAQDGAVTTLKSGLKVLPGEIVDATFLSAQALDAFLAETL
ETAKAENLLYSVHLKATMMKVSDPIIFGHVVKAYFADVFDRNGDVIAREGLSPNNGLGAI
LDGLASVEGGAEIAEEIAADLDRGPRLSYVNSDKGITNLHVPSDVIVDASMPALIRNGGK
LWGADGGEDDTLAVIPDSSYAGVYQATIDDVIANGPLDPATIGTVSNVGLMAQAAEEYGS
HDKTFEIETAGRVQIVDSEGEVLIEHEVEAGDIWRATQTKDIPVRDWVKLAVGRARATGV
PAVFWLDANRAHDAQLIAKVQTSLGKLDTKGITTIILPPAEATRYSLARMRQGLDTISVT
GNVLRDYLTDLFPILEVGTSAKMLSIVPLLAGGGLFETGAGGSAPKHVQQLLAEDYLRWD
SLGEFFALAASFEHYAGFTGNAKAQVLADTLDAATGTFLENDKSPGRALGTIDNRGSHFY
LALYWVQELAKQTEDAELAAAFAPVAAALAANEHSIVEELLAVQGSPVDIGGYYHPDENL
VAQVMRPSATLNGIVDGI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgactcgaccatcatctacacccacaccgacgaggcaccggcgctcgcgacggca
tccttcctccccatcgtgcaggccgtgacccggcaggccggggtcgacatcgagacgcgc
gacatctcgctggccggccgcatcctggcagccttcccgcagaagctcacgcccgagcag
caggtgggcgacgcgctcgccgagctcggcggcctcgcgacgctgcccgaggccaacatc
atcaagctgcccaacatctcggcgtcgatcccccagttgaaggccgccatcgccgagctg
cagggccagggctacgacatccccgactacccggacgagccgcagtccctcgacgagaag
gacgtgcgcgcccggtacgaccgcatcaaggggtccgccgtgaaccccgtcctgcgcgag
ggcaacagcgaccgccgtgccccgctgtcggtgaagaactacgcacgcaagcacccgcac
cgcaacaaggcgttcgccgccggctcccggacgcgcgtcgcgacgatgggccatgacgac
ttccgctcgaacgagaagtccgtggtcatcccgagcgacgacgtgctcacgatccagcac
gtcgctcaggacggcgcggtcacgacgctcaagagcgggctcaaggtgctgcccggcgag
atcgtcgacgccacgttcctctcggctcaggcgctcgacgccttcctcgccgagaccctg
gagacggcgaaggcggagaacctcctctactcggtgcacctgaaggccacgatgatgaag
gtcagcgacccgatcatcttcggccatgtcgtgaaggcctacttcgccgacgtcttcgac
cgcaacggcgacgtcatcgcgcgcgagggtctcagccccaacaacgggctcggtgcgatt
ctggacggcctcgcgagcgtcgagggcggcgcggagatcgccgaggagatcgcggccgac
ctcgaccgcggcccgcgcctctcgtacgtcaactccgacaagggcatcaccaacctgcac
gttccgtcggacgtcatcgtggatgcatccatgcccgcgctcatccgcaacggcggcaag
ctgtggggcgccgacggaggagaggacgacacgctcgccgtcatcccggactcgtcgtac
gcgggggtctaccaggccacgatcgacgacgtcatcgccaacggtccgctcgaccccgcg
acgatcggcacggtctccaacgtcggcctcatggcgcaggcggcggaggagtacggcagc
cacgacaagaccttcgagatcgagaccgccggccgcgtgcagatcgtcgactccgagggc
gaggtgctcatcgagcacgaggtcgaggcgggcgacatctggcgcgcgacgcagacgaag
gacatcccggttcgcgactgggtgaagctcgccgtgggccgcgcccgcgcgaccggcgtg
ccggcggtgttctggctcgacgcgaaccgcgcgcacgacgcgcagctcatcgccaaggtc
cagacctccctcggcaagctcgacaccaagggcatcacgacgatcatcctgccgcccgcc
gaggcgacgcggtactcgctggcgcgcatgcgccagggcctcgacacgatctcggtcacc
ggcaacgtcctgcgcgactacctcaccgatctcttcccgatcctcgaggtcggcacctcg
gccaagatgctgagcatcgtgccgctgctcgcgggcggcggactcttcgagacaggcgcc
ggcggctcggctccgaagcacgtgcagcagctcctcgccgaggactacctgcggtgggac
tccctgggcgagttcttcgcgctcgccgcgtcgttcgagcactacgccggcttcacgggc
aacgcgaaagcgcaggtcctcgccgacacgctggatgccgcgaccggcacgttcctcgag
aacgacaagtcgcccggccgtgcgttgggcacgatcgacaaccgcggcagccacttctat
ctcgcgctgtactgggtgcaggagctcgcgaagcagaccgaggatgccgagctcgccgcc
gcgttcgcgccggtcgccgcggcgctcgcggccaacgagcactcgatcgtcgaggagctg
ctcgctgtgcagggctcgccggtcgacatcggcggctactaccacccggacgagaacctg
gtggcgcaggtcatgcgtccgtccgcgacgctgaacggcatcgtcgacggcatctga
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